Gene Ndas_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0052 
Symbol 
ID9243879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp64275 
End bp64946 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003678010 
Protein GI297559036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00190236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGTTC CGCGACCGAT ATCCCCCGCC CGCGCCCTCC TGGCGACGGC TGCGGCGGGT 
GTCCTGGCCC TGGCCTGGGG CGGTAGCGCC TCCGCCCAGC AGGGTCCGAC CACGGTGACG 
CCCGCCGGTG CGGCCTTCGA GGCCGCTCTG AGCGGCAGCG CCACCTTCAC CGCCGGCAGC 
GTCGTGGTGA CCTGCGACGC GTCGTCCACC TCTCCGGGCA ACGGGAACAA CCTGGTTCCC 
ACGGCTCCCG GCAACCACAA CCCCGGTGGC GCGGTCTCCT CGACCATCAA CGCGCCGGAC 
TTCACGGACT GCTCGACCAA CGTCCCCTTC GTGTCCGCGA CGGTCACCGT GGCCGATCCC 
GTGTGGGAGA TGACCATGCA GCACGGGTCA CCGACCGTCG GCACCATGGT GATCCCGGCC 
GGGGGCATCG TGGTGACCAC GAGCGGCCTG GCCTCGTGCA CCGCGACGGT CAGCCCTGAC 
GCGGCCGCCG CCATCGGCGG CACGTGGACC AACGGCTCCC CCGCCTCGAC CCTGGCCTTC 
GACACCGCGG CCCCGGTCGA GGTGACGGGC GGGTTCGGCT GCCCGACCAG CGCGACGCAG 
GCCCCCTTCG AGGCGGTCTA CGAGGTGACC AACGCCGACG CCCCGTCCTC GCCCATCACC 
GTGACCGGCT AG
 
Protein sequence
MSVPRPISPA RALLATAAAG VLALAWGGSA SAQQGPTTVT PAGAAFEAAL SGSATFTAGS 
VVVTCDASST SPGNGNNLVP TAPGNHNPGG AVSSTINAPD FTDCSTNVPF VSATVTVADP 
VWEMTMQHGS PTVGTMVIPA GGIVVTTSGL ASCTATVSPD AAAAIGGTWT NGSPASTLAF 
DTAAPVEVTG GFGCPTSATQ APFEAVYEVT NADAPSSPIT VTG