Gene Ndas_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0032 
Symbol 
ID9243859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp42614 
End bp43207 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content75% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003677990 
Protein GI297559016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.227171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.348015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTG AGGACACGGA CACGGAGGAA CCCGCGAAGA GCGAGTTCAC CCGGTTCTTC 
GAGCGCTACC ACGGCGACGT GTACCGATAC GCCGTGCGCC GCCTGGGCCC GGACCTCGCG
GACGACGTCG CCGCCGAGAC CTTCGGCGTC GCCTGGCGCA GGTACGACCG CCTGCCCAAG
GACCAGCCCC TGCCCTGGCT CTACGGGGTG GCGCGCAACG TCATCCGGAC CCGGCTGCGC
GGCGAGCGCC GCCGAGGCGA GGTGCTCGGC GCCGGGGTCG CCGCAGACGC CCCCGGCACG
GCCGACACCG TCCGCCAGGT GGAGGAGCGG GACGCCGCGC TGCGCGCCCT GGACCGGCTC
AGCGCCACCG ACCGCGAACT GGTGATGCTC CTGGCCTGGG AGGGCCTGGA ACCGGCCGAG
GCGGCCCGGG TCCTGGGCTG CACCACCGCC ACCGTGCGCG TGCGCCTGCA CCGGGCCCGC
CGCCGGATCG AGCGCTTCCT GGACTCCTCG CCCCCGGCCG GCCGGGACCA GCCCCCACCG
CGTCCGGCTA CGCCGGGCCC CACGCACGTC CGAGTTCCCG TGGAGGAGAA GTGA
 
Protein sequence
MSSEDTDTEE PAKSEFTRFF ERYHGDVYRY AVRRLGPDLA DDVAAETFGV AWRRYDRLPK 
DQPLPWLYGV ARNVIRTRLR GERRRGEVLG AGVAADAPGT ADTVRQVEER DAALRALDRL
SATDRELVML LAWEGLEPAE AARVLGCTTA TVRVRLHRAR RRIERFLDSS PPAGRDQPPP
RPATPGPTHV RVPVEEK