Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0032 |
Symbol | |
ID | 9243859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 42614 |
End bp | 43207 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003677990 |
Protein GI | 297559016 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.227171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.348015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTG AGGACACGGA CACGGAGGAA CCCGCGAAGA GCGAGTTCAC CCGGTTCTTC GAGCGCTACC ACGGCGACGT GTACCGATAC GCCGTGCGCC GCCTGGGCCC GGACCTCGCG GACGACGTCG CCGCCGAGAC CTTCGGCGTC GCCTGGCGCA GGTACGACCG CCTGCCCAAG GACCAGCCCC TGCCCTGGCT CTACGGGGTG GCGCGCAACG TCATCCGGAC CCGGCTGCGC GGCGAGCGCC GCCGAGGCGA GGTGCTCGGC GCCGGGGTCG CCGCAGACGC CCCCGGCACG GCCGACACCG TCCGCCAGGT GGAGGAGCGG GACGCCGCGC TGCGCGCCCT GGACCGGCTC AGCGCCACCG ACCGCGAACT GGTGATGCTC CTGGCCTGGG AGGGCCTGGA ACCGGCCGAG GCGGCCCGGG TCCTGGGCTG CACCACCGCC ACCGTGCGCG TGCGCCTGCA CCGGGCCCGC CGCCGGATCG AGCGCTTCCT GGACTCCTCG CCCCCGGCCG GCCGGGACCA GCCCCCACCG CGTCCGGCTA CGCCGGGCCC CACGCACGTC CGAGTTCCCG TGGAGGAGAA GTGA
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Protein sequence | MSSEDTDTEE PAKSEFTRFF ERYHGDVYRY AVRRLGPDLA DDVAAETFGV AWRRYDRLPK DQPLPWLYGV ARNVIRTRLR GERRRGEVLG AGVAADAPGT ADTVRQVEER DAALRALDRL SATDRELVML LAWEGLEPAE AARVLGCTTA TVRVRLHRAR RRIERFLDSS PPAGRDQPPP RPATPGPTHV RVPVEEK
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