| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_R0048 |
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| Symbol | |
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| ID | 8449746 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4551544 |
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| End bp | 4554631 |
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| Gene Length | 3088 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | 645043169 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000200922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000167099 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTAAGTTTTT AAGAGCACAT GGTGGATGCC TTGGCACCAG GAGCCGATGA AGGACGTGGG
AGGCTGCGAT AAGCCTCGGG GAGCTGTCAA CCGAGCTGTG ATCCGAGGAT GTCCGAATGG
GGAAACCCCG CACGAGTCAT GTCGTGTGAC CCGCACCTGA ATGTATAGGG TGTGTGGAGG
GAACGTGGGG AAGTGAAACA TCTCAGTACC CACAGGAAGA GAAAACAATT GTGATTCCGT
GAGTAGTGGC GAGCGAAAGC GGATGAGGCT AAACCGTTGG CGTGTGATAC CCGGCAGGGG
TTGCGTTGGC GGGGTTGTGG GGATGGTGTG TGCTGGGCCT GCCGGCCTGG CGGACAGTGA
TAAAAACTTG TGTTAGTCGA ACGGAATTGG AAAAACCGGC CGTAGTGGGT GATAGCCCCG
TAGGCGAAAA CACTTGTTCT GTCTTGCATT GTTTCCCAAG TAGCAGCGAG CTCGTGAAAT
TCGCTGTGAA TCTGGCGGGA CCACCCGCTA AGCCTAAATA CTCCCTGGTG ACCGATAGCG
GACAAGTACC GTGAGGGAAA GGTGAAAAGT ACCCCGGGAG GGGAGTGAAA TAGTACCTGA
AACCATGTGC TTACAATCCG TCGGGGCTGA GTCCTTGTGG CTTGGTGACG GCGTGCCTTT
TGAAGAATGA GCCTGCGAGT TAGTGGTGTG TGGCTTGGTT AACCTGTGTG GGGTAGCCGT
AGCGAAAGCG AGTCCGAATA GGGCGTTGTG GTCGCATGCT CTAGACCCGA AGCGAAGTGA
TCTACCCATG GCCAGGATGA AGCGACGGTA AGACGTCGTG GAGGTCCGAA CCCACCAGGG
TTGAAAACCT GGGGGATGAG CTGTGGGTAG GGGTGAAAGG CCAATCAAAC TTCGTGATAG
CTGGTTCTCC CCGAAATGCA TTTAGGTGCA GCGTTGCGTG TTTCTTTCCG GAGGTAGAGC
ACTGGATGGT CTAGGGGGCC TACAAGCTTA CCGAAATCAA CCAAACTCCG AATGCCGGGA
AGTGAAGCGT GGCAGTGAGA CTGTGGGGGC TAAGCTTCAT AGTCGAGAGG GAAACAGCCC
AGATCGCCGG TTAAGGCCCC TAAGCGTGTG CTAAGTGGGA AAGGATGTGG GATTGCCCAG
ACAACCAGGA GGTTGGCTTA GAAGCAGCCA TCCTTTAAAG AGTGCGTAAT AGCTCACTGG
TCAAGTGGTT CCGCGCCGAC AATGTAGCGG GGCTCAAGCA CATCGCCGAA ACCGCGGCAT
CTCACCTTCA GTGGTGGGTT GGGTAGGGGA GCGTCGTGTG GGCGGTGAAG CGGCGGAGTG
ATCCAGTCGT GGAGGCCACG CGAGTGAGAA TGCAGGCATG AGTAGCGAAT GAGGAGTGAG
AACCTCCTCC ACCGATTGAC CAAGGGTTCC TGGGCCAGGT TCATCCGCCC AGGGTGAGTC
GGGACCTAAG GCGAGGCCGA CAGGCGTAGT CGATGGACAA CGGGTTGATA TTCCCGTACC
CGTGATGGAG CGCCAATGAC GAGACCGGTG ATGCTGACCG CCCGAACCAT GGCCCGACTT
CGGTTGGGTT TGTGGGGAGC GCGGGACCCT ATCCGGTAGT AGTCAAGCGA TGGGGTGACA
CAGGAAGGTA GCGTCGCCAG TGAGTGGTAG TACTGGTGTA AGGGTGTAGG TAGCGTGGGT
AGGTAAATCC GTCTGCGTGT TGATCTGAGA CCTGATGCAT AGCCGATTGA GGCGAAGTAG
CGTGATCCTA TGCTGTCGAG AAAAGCCTCT AGCGAGCTCC GAGCGGCCCG TACCCCAAAC
CGACACAGGT GGTCAGGTAG AGAATACCGA GGTGATCGAG CGAACTATGG TTAAGGAACT
CGGCAAAATA CCCCCGTAAC TTCGGGAGAA GGGGGACCGA GGTGTGTGAA GCCCCTTGCG
GGCTAGCACG TTTTGGTCGC AGAGACCAGG GAGAAGCGAC TGTTTACTAA AAACACAGGT
CCATGCGAAG TCGTAAGACG AGGTATATGG ACTGACGCCT GCCCGGTGCT GGAAGGTTAA
GAGGACCGGT TAGTCCGTAA GGGCGAAGCT GAGAATTTAA GCCCCAGTAA ACGGCGGTGG
TAACTATAAC CATCCTAAGG TAGCGAAATT CCTTGTCGGG TAAGTTCCGA CCTGCACGAA
TGGCGTAACG ACTTCTCTAC TGTCTCAACC ATAGGCTCGG CGAAATTGCA TTACGAGTAA
AGATGCTCGT TACGCGCGGC AGGACGGAAA GACCCCGGGA CCTTTACTAT AGCTTGGTAT
TGGTGTTCGG TTCGGCTTGT GTAGGATAGG TGGGAGACTG TGAAGCGGCC ACGCCAGTGG
TTGTGGAGTC GTCGTTGAAA TACCACTCTG GTCGTACTGG ATGTCTAACT TCGGACCGTG
ATCCGGTTCA GGGACAGTGC CTGGTGGGTA GTTTAACTGG GGCGGTTGCC TCCTAAAGAG
TAACGGAGGC GCCCAAAGGT TCCCTCAGCC TGGTTGGCAA TCAGGTGTTG AGTGTAAGTG
CACAAGGGAG CTTGACTGTG AGACAGGCGT GTCGAGCAGG GACGTAAGTC GGGACTAGTG
ATCCGGCACC TCCGAGTGGA AGGGGTGTCG CTCAACGGAT AAAAGGTACC CCGGGGATAA
CAGGCTGATC TTGCCCAAGA GTCCATATCG ACGGCATGGT TTGGCACCTC GATGTCGGCT
CGTCGCATCC TGGGGCTGGA GTAGGTCCCA AGGGTTGGGC TGTTCGCCCA TTAAAGCGGC
ACGCGAGCTG GGTTTAGAAC GTCGTGAGAC AGTTCGGTCC CTATCCGCCG CGCGCGTAGG
AGTCTTGCGG AAGGCTGTCC CTAGTACGAG AGGACCGGGA CGGACGAACC TCTGGTGTGC
CAGTTGTTCC GCCAGGAGCA TGGCTGGTTG GCTACGTTCG GAAGGGATAA CCGCTGAAAG
CATCTAAGCG GGAAGCCTGT TCCTAGATGA GGGCTCCCAC CCCTAGTGGG TTAAGGCCCC
CGGTTAGACC ACCGGGTTGA TAGGCCGGAA GTGGAAGCAT CGTAAGGTGT GGAGCTGACC
GGTACTAATA GGCCGAGGAC TTACCACA
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| Protein sequence | |
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