Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5305 |
Symbol | |
ID | 8450938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5927870 |
End bp | 5930314 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645044338 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003204560 |
Protein GI | 258655404 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAGGT CGGCGGAAGC GGTCATCGAG GTCGACGGTT CGGCCGGGCC CAGTCGCGTC GACTGGCGGC GGCCGGCGGC GGTCGTGGCC GGCGTGATCA CCGGGATCCT GGTGCTCGCC GGGCTGCTGT CCGCCCTGCT CTACGGCGCC GACTCGGACC CGTCCGGCCT GGTCTCCAAC CTGGCCCAGC TGACCGCGGC GGCCCTCGCG ACGGCGGCCG CGGCCGGCGC GGCCCGGCGG TCCGAACCCG CCGGCCGGCT CCGGTGGTGG CTGGTCGCGC TGGCCTGCGG CTTGTGGACG ATCGGGCAGA GCTACTGGTG CTACGTGGAG CTGATTCTCG GGCAGGACGT GCCCGAGGTG TCGCCGGCAG ACCTGTTCTT CCTGTCCTTC ACCGCCCTGA TGATCGTGGC GGTGGCGCCG ACCGGCGGTT CGCGCAGCGA CCGGCTGCGG ATCCTGCTGG ACGGCTTCAT CATCGGCATG TCGCTGTTCA CCATCAGCTG GTCGACCTCG ATCGACGCGA TCACCGCCAA TCGCACCCCG GACACCGAGC CGTTGGCCAT GGTGATCAAC CTGGCCTACC CGTGCGGCGA CGTGGTGGTG CTGACGATGG CCATCCTGAG CCTGTCCCGC CGCACCGTCG ACCGCAGCGG GCTGACCGCG GTGGCCGCCG GAATGGGCCT GATCGCCGTG TCCGACGCCT TCTACGCCTA CCTGACCTCC TCCGGCGAAT CCACCTCGGG TTCGCTCGTC GGGATCGGGT GGGTGGCCGG CTTCGGCCTG ATCGCCTGCG CCGCCGGGGC CCGCGTCCGG GTCGGCGCCC CCGCACCGGT CGAGCCGCCG ACCGGTCCCC ATACCGTGAC CGAGACCGGC GGCGAGACCG GCGTCCCGCT CGACGTGCGC CGGGCCAGCG CCCTGCCCTA CGTCCCTCTC GTGTTGGCCC TGCTGGTGGT GGGGGCCGAC CGGATCGGCG GGGAACCGGT GGACCGGGTC GCCGGGCCGG CCCTCATCGT GACCTTCCTC GGGGTGTTGG TCCGGCAGTA CCTGACCATC CGGGACAACG CCGCGCTGAC CGCCAACCTG GCCCGCCGGG AGAACCAGCT GCACCGGCAG GCGTTCCAGG ACATCCTGAC CGGGCTGCCC AACCGGGCCC TGTTCACCGA CCGGGCGGCG CACGCTCTGG AGCAGCACCG GCAGAGCATG CGACCGCTGT CGTTGCTGTT CGTCGACCTG GACGACTTCA AGGCGGTCAA CGACACCCTG GGGCATCCGG TCGGCGACGA GCTGGTGATC CGGGTGGCCG AGCGGCTGCG GGGCGCGATC CGGGCCAGCG ACACGGTGGC CCGCTTCGGC GGCGACGAGT TCGCGGTGCT CGCCGAGGGT GAGGACGCCG ACGGGGTCGA GCTGGGTTCC CGGCTGGTCG AGGCGCTGCG GCCACGATTC GTGCTCGGCG AGCACGGCCT GTCCATCGGC GCCAGCATCG GCATCGCCGA GGTGCCGGCC GAGCATCCGA CGCCGACCCT GGACGACCTG TTCTCCCGGG CCGACATCGC CATGTACGCG GCCAAGCGGG CCGGCAAGGG CCAGATCGCC CTGTACGACT CGACGATGGT GCTGCCGGAG GCGGCCGACC TGCAGTACCG GCCGCTGCTG ATCGAGGCGA TCGGCAGCGG CGGCATCGAC TGCGTGTTCC AGCCGATCCT GGACCTGGAC AGCGGCCGGG TGCACTGCAT GGAGGCGCTG GCCCGCTGGC AGGTCGGCGA CCAGGTGGTG GCCCAGGACT ACTTCATCCA GCTCGCCGGC CGGCTCAAGC TGCTCCCCGC GCTGACCGAC CTGATGGTCG ACCGGGCCTG CGCCACGCTG GCCGACTGGA CCGAGCGGCT GGGGTGCGAC GACCTGCGGG TCGGGGTCAA CGTGCCGCCC GGCCTGATGG CCGACCGCGA CTTCCCCCGG CGCATCGACG CCGCCCTGCG CCGGCACCGG ATCCGGCCCG ACCGGCTGGT CCTGGAGATC ACCGAGGACG CCCTGATCGG CGACGTCGCC ACCTCCCGGG CGGTGGCCGA CCAGCTGCGG CTGGCCGGCA TCCGGCTGTG GCTGGACGAC TTCGGCACCG GCTACTCCTC GCTGCTGAGC CTGCGGCAGA TCTCCCTGCA GGCCGTCAAG ATCGACATCG AGTTCGTCGC CAACATCCAC ACCGACCCGT CGGCCGCCCA ATTCCTACGC GCGCTGCTGG CCCTGGGTCG CGACCTGGGC CTGATGGTGA TGGCCGAGGG GGTGGAACTG CCCGAGCAGG CCGCGGTGCT GGCCGAGCTG GGCTGCCGGT ACGTGCAGGG CTTCCTGTAC GCCCGGCCGG CCGCGGCCGC CGACCTGGAC GCGATGCTCG CCGCGCAGCC GGCCCTGGCC ATGGGGGTGC CGGCCGCGCC CACCGTGTCC GCCGGGCGCG GCTGA
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Protein sequence | MIRSAEAVIE VDGSAGPSRV DWRRPAAVVA GVITGILVLA GLLSALLYGA DSDPSGLVSN LAQLTAAALA TAAAAGAARR SEPAGRLRWW LVALACGLWT IGQSYWCYVE LILGQDVPEV SPADLFFLSF TALMIVAVAP TGGSRSDRLR ILLDGFIIGM SLFTISWSTS IDAITANRTP DTEPLAMVIN LAYPCGDVVV LTMAILSLSR RTVDRSGLTA VAAGMGLIAV SDAFYAYLTS SGESTSGSLV GIGWVAGFGL IACAAGARVR VGAPAPVEPP TGPHTVTETG GETGVPLDVR RASALPYVPL VLALLVVGAD RIGGEPVDRV AGPALIVTFL GVLVRQYLTI RDNAALTANL ARRENQLHRQ AFQDILTGLP NRALFTDRAA HALEQHRQSM RPLSLLFVDL DDFKAVNDTL GHPVGDELVI RVAERLRGAI RASDTVARFG GDEFAVLAEG EDADGVELGS RLVEALRPRF VLGEHGLSIG ASIGIAEVPA EHPTPTLDDL FSRADIAMYA AKRAGKGQIA LYDSTMVLPE AADLQYRPLL IEAIGSGGID CVFQPILDLD SGRVHCMEAL ARWQVGDQVV AQDYFIQLAG RLKLLPALTD LMVDRACATL ADWTERLGCD DLRVGVNVPP GLMADRDFPR RIDAALRRHR IRPDRLVLEI TEDALIGDVA TSRAVADQLR LAGIRLWLDD FGTGYSSLLS LRQISLQAVK IDIEFVANIH TDPSAAQFLR ALLALGRDLG LMVMAEGVEL PEQAAVLAEL GCRYVQGFLY ARPAAAADLD AMLAAQPALA MGVPAAPTVS AGRG
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