Gene Namu_5298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5298 
Symbol 
ID8450931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5919116 
End bp5919838 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content76% 
IMG OID645044331 
ProductUracil-DNA glycosylase superfamily 
Protein accessionYP_003204553 
Protein GI258655397 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACTG CCCAGATCCC CACGCTGGCC GAACTGGACC GGACGATCGC CGGCTGCCGG 
GCCTGCCCCC GGCTGGTGGA ATGGCGGGAA GAGGTGGCCC GGGTCAAGCG GGCCGCCTTC
CGCGACCAGA CCTACTGGGG TCGGGGGGTG CCCGGGCTGG GGCCGGCGGA CGCCCGGCTG
CTCATCGTGG GCCTGGCCCC GGCCGCGCAC GGAGCCAACC GGACCGGGCG GATGTTCACC
GGGGACCGCA GCGGCGACGT GCTGTTCGCC GCCCTGCACC GGTGCGGACT GGCCTCGCAG
CCGACGTCGA CGCACCGCGG CGACGGGCTG ACCCTGCGCG GGGTGCGGAT CACCGCCCCC
GTGCACTGCG CCCCGCCGGA CAACCGGCCC ACGCCGACCG AGATCGCCAC CTGCTCGGCG
TACCTGCGCC GGGAGCTGGC GCTGATGGCC CCCACGGTGC GCGTGGTGCT CACCCTGGGG
GCCATCGGCT GGCAGGCGAT GCTGCGCGTC CTGATCGCGG ATGGCTGGCC GATGCCGCGA
CCCCGGCCCC CGTTCGGCCA CGGCCGCGAG GTGGCGCTGA GCCACCCCGA CGGCCGCCGG
CTGACCCTGC TCGGCTGCTA TCACGTCAGC CAGCAGAACA CCTTCACCGG CCGGCTCACG
CCGGCCATGC TGGACCAGGT GCTGCGCCGG GCCTGGGCGC TGACCACCGA CGAGCCGCAC
TGA
 
Protein sequence
MPTAQIPTLA ELDRTIAGCR ACPRLVEWRE EVARVKRAAF RDQTYWGRGV PGLGPADARL 
LIVGLAPAAH GANRTGRMFT GDRSGDVLFA ALHRCGLASQ PTSTHRGDGL TLRGVRITAP
VHCAPPDNRP TPTEIATCSA YLRRELALMA PTVRVVLTLG AIGWQAMLRV LIADGWPMPR
PRPPFGHGRE VALSHPDGRR LTLLGCYHVS QQNTFTGRLT PAMLDQVLRR AWALTTDEPH