| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5293 |
|---|
| Symbol | |
|---|
| ID | 8450926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 5912269 |
|---|
| End bp | 5912820 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645044326 |
|---|
| Product | protein of unknown function DUF1470 |
|---|
| Protein accession | YP_003204548 |
|---|
| Protein GI | 258655392 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTCA CCCATGACAC GGAGGTCGCG CTGGCCGCGG CCGCCGCCCT GGTGAACACC
GCCCCCAACC CGGACACCGG TGACGCCGAG GAGCTCGCCG ATGTCGAGGA CCTCGACCGG
TTCGTGCGGA CCTGGGGATG GACCGGCAGC CGGCACCGGG ACGAGGCCGA GCTGGCCGCG
GTGCATGCGC TGCGGCCGCG GCTGCGCCCG ATCTGGGACG CCGACGTGGA CGGGGTGGTC
GAGATCGTCA ACGGCCTGCT GCGGGAATTC CAGGCCCTGC CCCAGCTGGT CAAGCACGAC
GAGTGGGACT ACCACCTGCA CGCGACGCGT CCGGATGCGC CGCTGGCCGC CCGGATGGCG
GTGGAGGCGG CGATGGCCCT GGTCGACTTG GTTCGGGCCG GCGAGCTCGA GCGGCTGCGC
ACCTGCCAGG CCCCCGACTG CCAGGACGTC GTGGTGGACC TGTCGAAGAA CCGCTCCAAG
CGCTTTTGCG AGTCGGGCTG CGGCAACAGG ATGGCGGTGG CCGCCTACCG GGCCCGGCGC
TCGTCTCTAT AG
|
|---|
| Protein sequence | MVFTHDTEVA LAAAAALVNT APNPDTGDAE ELADVEDLDR FVRTWGWTGS RHRDEAELAA
VHALRPRLRP IWDADVDGVV EIVNGLLREF QALPQLVKHD EWDYHLHATR PDAPLAARMA
VEAAMALVDL VRAGELERLR TCQAPDCQDV VVDLSKNRSK RFCESGCGNR MAVAAYRARR
SSL
|
|---|
| |