Gene Namu_5249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5249 
Symbol 
ID8450880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5858741 
End bp5860081 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content58% 
IMG OID645044280 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003204504 
Protein GI258655348 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CCTCCCACGC TGATCACTTG CAAGACCGGC TACTCGCGCG ATCGGCCTCC 
ATCGGGATCA TCGGCCAAGG CTATGTGGGT CTGCCTCTTG CCCTTCTATT CGCCGAGTCC
GGCTTATCAG TGATTGGCCT CGATACCGAC GACGCCAAGG TGCAATGTCT GAACGCTGGC
CGCTCGTTCA TCAAGCACAT TGGACCTGAC CGGATACGCG AGGCCGTCGA GAGCGGTGCA
TACCGCGCGA CCGGGAACTT CGATGAACTG GCCGAGTGCG ATGCTATTCT GATCTGTGTG
CCGACTCCCC TGGGGCGCCA TCGCGAGCCG GACAACTCCT ACATCCACGC GACCGGACGC
GAGATTGCCA CCCGACTCAA AGCCGGCCAA CTGATCGTTC TGGAATCGAC AACGTATCCG
GGCACGACCG CCCAGGAACT TCAGCCGATC CTGGAAGAAG GTTCGGGACT GAGCTGCGGC
ACAGACTTCT TCCTGGCGTT CTCGCCGGAG CGTGAAGACC CCGGACGTGG TGACTACAAC
ACCCGCACGA TCCCGAAGGT CGTTGGTGGT GTCGACACGA TATCGACCAA GCTTGCCGTC
GCCATGTATT CCATAGCTAT CACCAAGGTT GTACCCGTCT CGTCGGCGGC TGTTGCCGAA
TCGGCGAAGC TGTTGGAGAA CATCTTTCGA TCGGTAAACA TTGCCCTGGT GAACGAGCTC
AAGACGGTCT TCGACGCCAT GGATATCGAT GTCTGGGAGG TTATCGAAGC GGCCAAGACA
AAACCCTTCG GATACATGCC ATTCTATCCC GGGCCCGGTC TGGGCGGGCA TTGCATCCCG
CTGGATCCTT TTTTCCTCTC GTGGAAAGCC GCGGAACATG GGCGCTGGGC ACGCTTCATT
GAGCTGGCCG GCGAGATCAA CACCTCGATG CCTGCATGGG TAGTAAGCAA GACCGCAGCT
GCGCTCAACG ACCACGGCAA GTCTGTCAAG AACTCGAAAA TCCTAGTCTT AGGCCTGGCT
TACAAGCCCA ACGTCGACGA CGACCGCGAA TCGCCCTCGT ACGAGCTCAT CTCTGAGCTG
TCCAGCCGCG GTGCGCTTGT CGACTATTGC GATCCCTATT TTCCGCGCAC GGCACCCACT
CGCAAATGGA ATCTGGGCCT CGAATCGGTT GCTCTTTCCA ACGAAACGCT TCGATCTTAT
GACGCCGTGG TTGTCGCCAC CGCTCATGAG GAGTTCAAGG ATCAGACTCT CTACGCTGGC
GTTCCTCTGG TCATCGATAC TCGGAACATC GTGCTATCCC AGGGGTCCGC CGATGTGGAC
ATGACCCTGG TCAAGGCCTG A
 
Protein sequence
MTNSSHADHL QDRLLARSAS IGIIGQGYVG LPLALLFAES GLSVIGLDTD DAKVQCLNAG 
RSFIKHIGPD RIREAVESGA YRATGNFDEL AECDAILICV PTPLGRHREP DNSYIHATGR
EIATRLKAGQ LIVLESTTYP GTTAQELQPI LEEGSGLSCG TDFFLAFSPE REDPGRGDYN
TRTIPKVVGG VDTISTKLAV AMYSIAITKV VPVSSAAVAE SAKLLENIFR SVNIALVNEL
KTVFDAMDID VWEVIEAAKT KPFGYMPFYP GPGLGGHCIP LDPFFLSWKA AEHGRWARFI
ELAGEINTSM PAWVVSKTAA ALNDHGKSVK NSKILVLGLA YKPNVDDDRE SPSYELISEL
SSRGALVDYC DPYFPRTAPT RKWNLGLESV ALSNETLRSY DAVVVATAHE EFKDQTLYAG
VPLVIDTRNI VLSQGSADVD MTLVKA