Gene Namu_5063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5063 
Symbol 
ID8450694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5646723 
End bp5648801 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content69% 
IMG OID645044099 
ProductSpermidine synthase-like protein 
Protein accessionYP_003204323 
Protein GI258655167 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG CCGCCCAGGA CAACACCGGT TCGACGACCG GTACGGTCAG CCCGACGAAC 
CGGTGGCGGC TGCGCCGCCG CACCGAGACG GATCCGGAAC GTCCCGATTA CGCCGTGGTC
CGGCGGCTGG TTCTCGGATC GGCGCTGATG CTGTTCCTGG AGCTGGCGCT GATCCGCTGG
CTCGGCGCCA ACGTGGTGCA CCTGAGCTAC TTCTCCAACT TCGTGCTGCT CGGCTCGTTC
CTGGGCATCG GCCTGGGCTT CCTGATCGCC CGCAAACGGT GGTCGATCCT GCCGGCCGCA
CCGGTCATCC TGGCCGCGCT GGTCATCCTG ACTTTCCTGG AACCGGTCAC CATCGACCGG
GCCGGCAACG ACGTCATCTA CTTCACCTCG CTGCACACCT CCGGCCCGCC CGCCTGGGCC
GTGCTGCCGG TCATCTTCGT GCTGGTGGCC GCGTGCCTGG CCGGGCCGGC CGAGGCGGTC
GGCCGCTGCT TCGCCGACCT GCGACCGCTC ACCGCCTACC GCTGGGACCT GGTCGGCTCG
CTGATCGGCA TCCTCTCGTT CACCGCGCTG TCGTTCCTGC GGGCGCCGTC GGTGGTCTGG
GGCGTCCTGG TCACCATCGG GTTCGTCCTG CTCATCGGCG GCTGGAAGCG CTGGCTCACG
GCCGCCAGCG GGCTGGCCAT GGTCGCGTTC CTGCTGGTCG AGACGCTGTC TCCGGGCATC
TCCTGGTCGC CCTACTACAA GATCCACACC GAGGACCGGG TGTTGGCCGA CGCGCCGATC
ACCGACATCT CGGTGAACGG GGTGCCGCAC CAGATCATGC GGCCGGCCCA GGTCCGGCTG
GCCGAGGAGC CGCAGTACGG GCTGCCGTAC GAGCGCTCGC CGGAGAACCC GCTGGGCAAC
GTGCTCATCA TCGGGGCCGG GTCCGGCTCG GACGTGGCGA TCGCCCTGTC CAAGGGCGCG
CAGCACGTGG ACGCCGTCGA CATCGACCCG CGGATCATGC AGATCGGCGC GGAGAAGAAC
CCCGACCACC CCTACGACGA CCCCCGGGTC ACCCGCTACG TCAACGACGG GCGGGCGTTC
CTGGAGACCA CCGACACCAA GTACGACCTG ATCCTGTTCG CCCTGCCGGA CTCGTTGGCG
CTGGTCACCG GGGCCTCGCA GATCCGGCTG GAGAGCTTCC TGTTCACCGA GCAGGCGCTG
ACCGCGGCTC GCGAACACCT CACCGACGAC GGCCTGTTCG CGATGTACAA CTACTACCGC
GAGGACTGGC TGATCGACCG GCTGGCCGGG ACCGCCGCCG CCGCGTTCGA CCACACCCCG
TGCGTGGACA AGGTCGGCGG CGGGCAGGCG GTGGTCAGCG CCGCCCTGAA CGAGCAGAAC
CAGTCGTGCG GCACGCCGTG GCAGGCCGCC GGCGCGGTGA TCGCGCCGGT CACCGACGAC
CGGCCGTTCC TGTACTTCCA GGGCGGCTCG ATCCCGGCGA TCTACCTGTG GACGCTGGCC
GGCATCCTGC TCATCTCGCT GATCGCGGTG CGGGCGCTGG GCGGACCGTT CCGGTCGATG
CGGCCCTACG CCGACCTGTT CTTCATGGGC GCGGCGTTCC TGCTGCTGGA GACCAAGAAC
ATCGCCACGT TCGCGCTGCT GTTCGGCACC ACCTGGCTGG TCAACGCGTT GGTGTTCGCC
GGTGTGCTGG TGATCGTGCT GGCGGCGGTG GAGACCACCC GCCGGTTCCG CACGCCGCCG
TTGCCGCTGG TGTTCGCCGG CATCGCCGTC TCGTTGGCGG TGTCCTACTT CATCGAACCC
GACTGGCTGC TCACCCTGCC GTTCTGGCCG CGGCTGGTGG TGGCCACCCT GCTGGCCTTC
ATCCCCATCT ACCTGGCCAA CGTGGCCTTC TCCAAGCGCT TCGGCGCCTC CGAGGACTCC
CGGTCGGCGT TCGGGCTGAA CCTGCTCGGC GCCATGCTGG GCGGCTGCAT GGAATACCTG
GCCCTGCTCA CCGGCTACCG GAACCTGCTC ATCCTGGTCG CCGCGCTGTA CCTGTGCGCC
TTCCTGCTCG CCCCCCGCAA GGGCCTGGTG ACCATCTGA
 
Protein sequence
MTDAAQDNTG STTGTVSPTN RWRLRRRTET DPERPDYAVV RRLVLGSALM LFLELALIRW 
LGANVVHLSY FSNFVLLGSF LGIGLGFLIA RKRWSILPAA PVILAALVIL TFLEPVTIDR
AGNDVIYFTS LHTSGPPAWA VLPVIFVLVA ACLAGPAEAV GRCFADLRPL TAYRWDLVGS
LIGILSFTAL SFLRAPSVVW GVLVTIGFVL LIGGWKRWLT AASGLAMVAF LLVETLSPGI
SWSPYYKIHT EDRVLADAPI TDISVNGVPH QIMRPAQVRL AEEPQYGLPY ERSPENPLGN
VLIIGAGSGS DVAIALSKGA QHVDAVDIDP RIMQIGAEKN PDHPYDDPRV TRYVNDGRAF
LETTDTKYDL ILFALPDSLA LVTGASQIRL ESFLFTEQAL TAAREHLTDD GLFAMYNYYR
EDWLIDRLAG TAAAAFDHTP CVDKVGGGQA VVSAALNEQN QSCGTPWQAA GAVIAPVTDD
RPFLYFQGGS IPAIYLWTLA GILLISLIAV RALGGPFRSM RPYADLFFMG AAFLLLETKN
IATFALLFGT TWLVNALVFA GVLVIVLAAV ETTRRFRTPP LPLVFAGIAV SLAVSYFIEP
DWLLTLPFWP RLVVATLLAF IPIYLANVAF SKRFGASEDS RSAFGLNLLG AMLGGCMEYL
ALLTGYRNLL ILVAALYLCA FLLAPRKGLV TI