| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5063 |
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| Symbol | |
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| ID | 8450694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 5646723 |
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| End bp | 5648801 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645044099 |
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| Product | Spermidine synthase-like protein |
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| Protein accession | YP_003204323 |
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| Protein GI | 258655167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACG CCGCCCAGGA CAACACCGGT TCGACGACCG GTACGGTCAG CCCGACGAAC
CGGTGGCGGC TGCGCCGCCG CACCGAGACG GATCCGGAAC GTCCCGATTA CGCCGTGGTC
CGGCGGCTGG TTCTCGGATC GGCGCTGATG CTGTTCCTGG AGCTGGCGCT GATCCGCTGG
CTCGGCGCCA ACGTGGTGCA CCTGAGCTAC TTCTCCAACT TCGTGCTGCT CGGCTCGTTC
CTGGGCATCG GCCTGGGCTT CCTGATCGCC CGCAAACGGT GGTCGATCCT GCCGGCCGCA
CCGGTCATCC TGGCCGCGCT GGTCATCCTG ACTTTCCTGG AACCGGTCAC CATCGACCGG
GCCGGCAACG ACGTCATCTA CTTCACCTCG CTGCACACCT CCGGCCCGCC CGCCTGGGCC
GTGCTGCCGG TCATCTTCGT GCTGGTGGCC GCGTGCCTGG CCGGGCCGGC CGAGGCGGTC
GGCCGCTGCT TCGCCGACCT GCGACCGCTC ACCGCCTACC GCTGGGACCT GGTCGGCTCG
CTGATCGGCA TCCTCTCGTT CACCGCGCTG TCGTTCCTGC GGGCGCCGTC GGTGGTCTGG
GGCGTCCTGG TCACCATCGG GTTCGTCCTG CTCATCGGCG GCTGGAAGCG CTGGCTCACG
GCCGCCAGCG GGCTGGCCAT GGTCGCGTTC CTGCTGGTCG AGACGCTGTC TCCGGGCATC
TCCTGGTCGC CCTACTACAA GATCCACACC GAGGACCGGG TGTTGGCCGA CGCGCCGATC
ACCGACATCT CGGTGAACGG GGTGCCGCAC CAGATCATGC GGCCGGCCCA GGTCCGGCTG
GCCGAGGAGC CGCAGTACGG GCTGCCGTAC GAGCGCTCGC CGGAGAACCC GCTGGGCAAC
GTGCTCATCA TCGGGGCCGG GTCCGGCTCG GACGTGGCGA TCGCCCTGTC CAAGGGCGCG
CAGCACGTGG ACGCCGTCGA CATCGACCCG CGGATCATGC AGATCGGCGC GGAGAAGAAC
CCCGACCACC CCTACGACGA CCCCCGGGTC ACCCGCTACG TCAACGACGG GCGGGCGTTC
CTGGAGACCA CCGACACCAA GTACGACCTG ATCCTGTTCG CCCTGCCGGA CTCGTTGGCG
CTGGTCACCG GGGCCTCGCA GATCCGGCTG GAGAGCTTCC TGTTCACCGA GCAGGCGCTG
ACCGCGGCTC GCGAACACCT CACCGACGAC GGCCTGTTCG CGATGTACAA CTACTACCGC
GAGGACTGGC TGATCGACCG GCTGGCCGGG ACCGCCGCCG CCGCGTTCGA CCACACCCCG
TGCGTGGACA AGGTCGGCGG CGGGCAGGCG GTGGTCAGCG CCGCCCTGAA CGAGCAGAAC
CAGTCGTGCG GCACGCCGTG GCAGGCCGCC GGCGCGGTGA TCGCGCCGGT CACCGACGAC
CGGCCGTTCC TGTACTTCCA GGGCGGCTCG ATCCCGGCGA TCTACCTGTG GACGCTGGCC
GGCATCCTGC TCATCTCGCT GATCGCGGTG CGGGCGCTGG GCGGACCGTT CCGGTCGATG
CGGCCCTACG CCGACCTGTT CTTCATGGGC GCGGCGTTCC TGCTGCTGGA GACCAAGAAC
ATCGCCACGT TCGCGCTGCT GTTCGGCACC ACCTGGCTGG TCAACGCGTT GGTGTTCGCC
GGTGTGCTGG TGATCGTGCT GGCGGCGGTG GAGACCACCC GCCGGTTCCG CACGCCGCCG
TTGCCGCTGG TGTTCGCCGG CATCGCCGTC TCGTTGGCGG TGTCCTACTT CATCGAACCC
GACTGGCTGC TCACCCTGCC GTTCTGGCCG CGGCTGGTGG TGGCCACCCT GCTGGCCTTC
ATCCCCATCT ACCTGGCCAA CGTGGCCTTC TCCAAGCGCT TCGGCGCCTC CGAGGACTCC
CGGTCGGCGT TCGGGCTGAA CCTGCTCGGC GCCATGCTGG GCGGCTGCAT GGAATACCTG
GCCCTGCTCA CCGGCTACCG GAACCTGCTC ATCCTGGTCG CCGCGCTGTA CCTGTGCGCC
TTCCTGCTCG CCCCCCGCAA GGGCCTGGTG ACCATCTGA
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| Protein sequence | MTDAAQDNTG STTGTVSPTN RWRLRRRTET DPERPDYAVV RRLVLGSALM LFLELALIRW
LGANVVHLSY FSNFVLLGSF LGIGLGFLIA RKRWSILPAA PVILAALVIL TFLEPVTIDR
AGNDVIYFTS LHTSGPPAWA VLPVIFVLVA ACLAGPAEAV GRCFADLRPL TAYRWDLVGS
LIGILSFTAL SFLRAPSVVW GVLVTIGFVL LIGGWKRWLT AASGLAMVAF LLVETLSPGI
SWSPYYKIHT EDRVLADAPI TDISVNGVPH QIMRPAQVRL AEEPQYGLPY ERSPENPLGN
VLIIGAGSGS DVAIALSKGA QHVDAVDIDP RIMQIGAEKN PDHPYDDPRV TRYVNDGRAF
LETTDTKYDL ILFALPDSLA LVTGASQIRL ESFLFTEQAL TAAREHLTDD GLFAMYNYYR
EDWLIDRLAG TAAAAFDHTP CVDKVGGGQA VVSAALNEQN QSCGTPWQAA GAVIAPVTDD
RPFLYFQGGS IPAIYLWTLA GILLISLIAV RALGGPFRSM RPYADLFFMG AAFLLLETKN
IATFALLFGT TWLVNALVFA GVLVIVLAAV ETTRRFRTPP LPLVFAGIAV SLAVSYFIEP
DWLLTLPFWP RLVVATLLAF IPIYLANVAF SKRFGASEDS RSAFGLNLLG AMLGGCMEYL
ALLTGYRNLL ILVAALYLCA FLLAPRKGLV TI
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