| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5038 |
|---|
| Symbol | |
|---|
| ID | 8450669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 5622618 |
|---|
| End bp | 5623568 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645044074 |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_003204298 |
|---|
| Protein GI | 258655142 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGAAC TGGTCACGCT GCCGCTGATC CAGGACGCCG CCACCCTGAT CCGTCCGCAC
GCGGTGCGCA CGCCGCTGCT GGCCGCGCCG TGGCCGGACC TGTGGCTCAA GCCGGAGAAC
CTGCAGCCGA TCGGTGCCTT CAAGATCCGC GGCGCGGTCA CCGCCATCGC CCGGCTGGAC
CCGGCCGCCC GGGCCGGCGG GGTGCTCGCC CACTCCTCGG GCAACCACGC ACAGGCGGTG
GCCTACGCGG CCCGCGCGTT CGGCACCACC GCGCACATCG TGATCCCGGA CAACGCCCCC
GAGCGCAAGA TCCAGGCCAC CCGCGACCTG GGCGCCACCG TCGAACTGGT GCCGTTGGAG
CAGCGCTTCA GCCGGCCCGA GGAGCTGGCG GCGGCCACCG GCAAGCCGAT GATCCCGCCG
TTCGACCACC CCGACGTCAT CTCTGGCCAG GGCACCATCG GCCTGGAGAT CGCGCAGGAC
CTGCCCGACG TGGACGTGGT GCTGGTCCCG GTCTCCGGCG GCGGGCTGAT CTCCGGGGTG
GCCGCGGCGA TCACCGCGCT GCTGCCGCGG GCGGTCGTCA TCGGGGTCGA GCCGGAGCTG
GCCGGGGACG CCGCCGAGTC GTTCCGGGCC GGCCGGCGCA TCCCGTGGAC CCCGGCCCAG
ACCGCCCGGA CGATGGCCGA CGGGCTGCGC ACGTTCACCG TCGGCGAGCT GCCCTGGGCG
CACATCAGCC GCCAGGTGCA CGACATCGTG ACGGTCACCG AGGACGAGAT CGCCGACGCG
ACCCGCCGGT TGCTGCTGCA GGCCCGGCTG GTCGCCGAAC CCAGCGGCGC GGTGGCCACC
GCCGCGTTCC TGCACCACAG GCACCAGCTG CCGCCGGGCC GCACCGTCGC GGTCGTCTCC
GGCGGCAACA TCGACCCGGC CGTGCTGCGC CGGCTGCTGG ACGCCGCGTG A
|
|---|
| Protein sequence | MPELVTLPLI QDAATLIRPH AVRTPLLAAP WPDLWLKPEN LQPIGAFKIR GAVTAIARLD
PAARAGGVLA HSSGNHAQAV AYAARAFGTT AHIVIPDNAP ERKIQATRDL GATVELVPLE
QRFSRPEELA AATGKPMIPP FDHPDVISGQ GTIGLEIAQD LPDVDVVLVP VSGGGLISGV
AAAITALLPR AVVIGVEPEL AGDAAESFRA GRRIPWTPAQ TARTMADGLR TFTVGELPWA
HISRQVHDIV TVTEDEIADA TRRLLLQARL VAEPSGAVAT AAFLHHRHQL PPGRTVAVVS
GGNIDPAVLR RLLDAA
|
|---|
| |