Gene Namu_4912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4912 
Symbol 
ID8450543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5482605 
End bp5483861 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content71% 
IMG OID645043951 
Producthypothetical protein 
Protein accessionYP_003204175 
Protein GI258655019 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2822] Predicted periplasmic lipoprotein involved in iron transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC GGACCCGCCG GCTCTGGCCG GCCGCGCTGC TCACGGCCGG TGCCCTGACC 
CTGACCGCGT GCGGCTCCGG GACCACGACC GCGTCGTCCG GCGGCACGAC GACCGCGTCG
GCCTCCGATG CGGCGGCCAC CGGTTCGGCG GCGTCGGGCT CGGCGTCAGT CTCCGGATCG
GCCCAGCCCG GCCAGGTCAC CGTCACCGTC ACCGACGCGG ACGGCTGCGT GGCCAGCCCG
AACAGCGTGC CGGCCGGGCA GGTGACCTTC GTGGTCACCA ACGTCGACGC CGTGGGCGTC
ACCGAGGTCG AACTGGTCGC CGATCAGCGC ATCGTCGGCG AGCGGGAGAA CCTGGCGCCC
GGTTTCGACA GCACGTTCTC GGCCCGCCTG GACGGCGGCA CCTTCGAGAT CTACTGCCCG
GGGGCCAGCA CCGAGCGCAG CACGTTCACG GTGACCGGGC AGGCGGCCGC CCAGGACTCC
GACCTGGCCG CACTGCTGGA CCAGGCGACC AAGGACTACG CCGCCTACGT CGACGACCAG
ATCACGTTCC TGCTGGTCCC GGTGCAGGAG ATGGCCGCCG CGATCCACGC CGGCGACGTG
GCCGCCGCGC AGGCCGCCTA CATCAAGGCC CGGCCGTTCT ACGAGCGCAT CGAGCCGGTC
GCCGAGTCCT TCCCGGACCT GGACCCGGCC ATCGACCTGC GCGTCGGTGA CGTCGAGCAG
GGCACCACCT GGACCGGTTT CCACCCGATC GAGCAGGGCC TGTTCGAGCG GCAGAGCACC
GAGGGGCTGG GCGACCTGGC CGACCAGCTG ATCGTCGACA TCACCAGCCT GCAGACCCAG
GCGCAGAAGC TGTCGGCGGC GACCAACGCC GGCACCGACG GTGGCTACCA GGCCTTCGAG
GTCGCCAACG GCGCGGCCAC CCTGCTGGAC GAGGTGCTGG CCTCGAAGAT CACCGGCGAG
GAGGAGGCGT ACTCCAAGAT CGACCTGCTG GACTTCGAGG CCAACGTGGA AGGATCGTTG
CAGGCGTTCG CGACGCTCAA GCCGGCCCTG AACCAGATCG ACCCGACGAT CGTGCCGCAG
ATCTCGGCGG CCTTCGACGC GCTGACCACC AAGCTGGCCA CGTACAAGGA CCCGACCTCG
CCCAGCGGGT GGGTCTCCTA CGACAAGCTG ACCGACGCCG ACAAGAAGGC GCTGGTCGCC
GCGCTGCTGG TGGTGCAGGA GCCGCTGTCG GCAGTCGCGC AGAAGATCAC CAACTAG
 
Protein sequence
MSIRTRRLWP AALLTAGALT LTACGSGTTT ASSGGTTTAS ASDAAATGSA ASGSASVSGS 
AQPGQVTVTV TDADGCVASP NSVPAGQVTF VVTNVDAVGV TEVELVADQR IVGERENLAP
GFDSTFSARL DGGTFEIYCP GASTERSTFT VTGQAAAQDS DLAALLDQAT KDYAAYVDDQ
ITFLLVPVQE MAAAIHAGDV AAAQAAYIKA RPFYERIEPV AESFPDLDPA IDLRVGDVEQ
GTTWTGFHPI EQGLFERQST EGLGDLADQL IVDITSLQTQ AQKLSAATNA GTDGGYQAFE
VANGAATLLD EVLASKITGE EEAYSKIDLL DFEANVEGSL QAFATLKPAL NQIDPTIVPQ
ISAAFDALTT KLATYKDPTS PSGWVSYDKL TDADKKALVA ALLVVQEPLS AVAQKITN