Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4912 |
Symbol | |
ID | 8450543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5482605 |
End bp | 5483861 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645043951 |
Product | hypothetical protein |
Protein accession | YP_003204175 |
Protein GI | 258655019 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2822] Predicted periplasmic lipoprotein involved in iron transport |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATCC GGACCCGCCG GCTCTGGCCG GCCGCGCTGC TCACGGCCGG TGCCCTGACC CTGACCGCGT GCGGCTCCGG GACCACGACC GCGTCGTCCG GCGGCACGAC GACCGCGTCG GCCTCCGATG CGGCGGCCAC CGGTTCGGCG GCGTCGGGCT CGGCGTCAGT CTCCGGATCG GCCCAGCCCG GCCAGGTCAC CGTCACCGTC ACCGACGCGG ACGGCTGCGT GGCCAGCCCG AACAGCGTGC CGGCCGGGCA GGTGACCTTC GTGGTCACCA ACGTCGACGC CGTGGGCGTC ACCGAGGTCG AACTGGTCGC CGATCAGCGC ATCGTCGGCG AGCGGGAGAA CCTGGCGCCC GGTTTCGACA GCACGTTCTC GGCCCGCCTG GACGGCGGCA CCTTCGAGAT CTACTGCCCG GGGGCCAGCA CCGAGCGCAG CACGTTCACG GTGACCGGGC AGGCGGCCGC CCAGGACTCC GACCTGGCCG CACTGCTGGA CCAGGCGACC AAGGACTACG CCGCCTACGT CGACGACCAG ATCACGTTCC TGCTGGTCCC GGTGCAGGAG ATGGCCGCCG CGATCCACGC CGGCGACGTG GCCGCCGCGC AGGCCGCCTA CATCAAGGCC CGGCCGTTCT ACGAGCGCAT CGAGCCGGTC GCCGAGTCCT TCCCGGACCT GGACCCGGCC ATCGACCTGC GCGTCGGTGA CGTCGAGCAG GGCACCACCT GGACCGGTTT CCACCCGATC GAGCAGGGCC TGTTCGAGCG GCAGAGCACC GAGGGGCTGG GCGACCTGGC CGACCAGCTG ATCGTCGACA TCACCAGCCT GCAGACCCAG GCGCAGAAGC TGTCGGCGGC GACCAACGCC GGCACCGACG GTGGCTACCA GGCCTTCGAG GTCGCCAACG GCGCGGCCAC CCTGCTGGAC GAGGTGCTGG CCTCGAAGAT CACCGGCGAG GAGGAGGCGT ACTCCAAGAT CGACCTGCTG GACTTCGAGG CCAACGTGGA AGGATCGTTG CAGGCGTTCG CGACGCTCAA GCCGGCCCTG AACCAGATCG ACCCGACGAT CGTGCCGCAG ATCTCGGCGG CCTTCGACGC GCTGACCACC AAGCTGGCCA CGTACAAGGA CCCGACCTCG CCCAGCGGGT GGGTCTCCTA CGACAAGCTG ACCGACGCCG ACAAGAAGGC GCTGGTCGCC GCGCTGCTGG TGGTGCAGGA GCCGCTGTCG GCAGTCGCGC AGAAGATCAC CAACTAG
|
Protein sequence | MSIRTRRLWP AALLTAGALT LTACGSGTTT ASSGGTTTAS ASDAAATGSA ASGSASVSGS AQPGQVTVTV TDADGCVASP NSVPAGQVTF VVTNVDAVGV TEVELVADQR IVGERENLAP GFDSTFSARL DGGTFEIYCP GASTERSTFT VTGQAAAQDS DLAALLDQAT KDYAAYVDDQ ITFLLVPVQE MAAAIHAGDV AAAQAAYIKA RPFYERIEPV AESFPDLDPA IDLRVGDVEQ GTTWTGFHPI EQGLFERQST EGLGDLADQL IVDITSLQTQ AQKLSAATNA GTDGGYQAFE VANGAATLLD EVLASKITGE EEAYSKIDLL DFEANVEGSL QAFATLKPAL NQIDPTIVPQ ISAAFDALTT KLATYKDPTS PSGWVSYDKL TDADKKALVA ALLVVQEPLS AVAQKITN
|
| |