Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4881 |
Symbol | |
ID | 8450511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5442283 |
End bp | 5443074 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645043919 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003204144 |
Protein GI | 258654988 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCGA TCGATCTCAC CGGCCGCACG GCCCTGGTCA CCGGCGGGGC CCAGGGCCTC GGCGAGGCGA TGGCGATTGC CCTGGCCGGG GCCGGCGCGA CGGTGATGAT CGCCGACATC CAGGACTCCG GCGAGCAGAC GGCCAAGGCG CTCGGCCCCG AGCACGGATT CGTCAAGCTC GACGTGACCG ACGAGGCGGC CTGGGACGCC GCCGTCACCC AGACCGTCGC CCAGCTGGGC GGTCTGGACA TCCTGGTCAA CAACGCCGGC GTCGAGATCA CCAGCCTGAT CACCGAGGTC CAGGTGGCCG ACATCCAGAA GATGCTGGAC GTCAACGTGC TGGGCACCAC GTTGGGGCTC AAGCACGGGT TGCGGGCGAT GCGACCCGGC GGGGTCGCCG GCCGGGGCGG CGCCATCGTC AACGTGGCCT CGGTGGCCGC GACCATCGCC TTTCCCGGCA TCGCGGTCTA CTCGGCGACC AAGTCGGCGG TCGACCGGCT GACCCGGGTG GCGGCCATGG AGTCCGGCAA GCTCGGCTAC GGCGTTCGGG TCAACTGTGT CTATCCGGGT CTGGTACCCA CCGCGATGGG CATCGGCCTG GCCAACGACG TCGCGGGCAT CGGCCTGTTC GAATCGGCGG AGGCGGCGGT GGGAGCCGTG GTCGAGCTGA CCCCGGCCGG CCGGCTGGGC CAGGTCGAGG ACATGGCCGA CGCGGTGGTG TTCCTGGCCT CCGACGCCGC CCGATTCATC ACCGGCGCCG GGCTGCCGGT CGACGGCGGG ATGGGCATGT GA
|
Protein sequence | MTSIDLTGRT ALVTGGAQGL GEAMAIALAG AGATVMIADI QDSGEQTAKA LGPEHGFVKL DVTDEAAWDA AVTQTVAQLG GLDILVNNAG VEITSLITEV QVADIQKMLD VNVLGTTLGL KHGLRAMRPG GVAGRGGAIV NVASVAATIA FPGIAVYSAT KSAVDRLTRV AAMESGKLGY GVRVNCVYPG LVPTAMGIGL ANDVAGIGLF ESAEAAVGAV VELTPAGRLG QVEDMADAVV FLASDAARFI TGAGLPVDGG MGM
|
| |