Gene Namu_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4881 
Symbol 
ID8450511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5442283 
End bp5443074 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID645043919 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003204144 
Protein GI258654988 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TCGATCTCAC CGGCCGCACG GCCCTGGTCA CCGGCGGGGC CCAGGGCCTC 
GGCGAGGCGA TGGCGATTGC CCTGGCCGGG GCCGGCGCGA CGGTGATGAT CGCCGACATC
CAGGACTCCG GCGAGCAGAC GGCCAAGGCG CTCGGCCCCG AGCACGGATT CGTCAAGCTC
GACGTGACCG ACGAGGCGGC CTGGGACGCC GCCGTCACCC AGACCGTCGC CCAGCTGGGC
GGTCTGGACA TCCTGGTCAA CAACGCCGGC GTCGAGATCA CCAGCCTGAT CACCGAGGTC
CAGGTGGCCG ACATCCAGAA GATGCTGGAC GTCAACGTGC TGGGCACCAC GTTGGGGCTC
AAGCACGGGT TGCGGGCGAT GCGACCCGGC GGGGTCGCCG GCCGGGGCGG CGCCATCGTC
AACGTGGCCT CGGTGGCCGC GACCATCGCC TTTCCCGGCA TCGCGGTCTA CTCGGCGACC
AAGTCGGCGG TCGACCGGCT GACCCGGGTG GCGGCCATGG AGTCCGGCAA GCTCGGCTAC
GGCGTTCGGG TCAACTGTGT CTATCCGGGT CTGGTACCCA CCGCGATGGG CATCGGCCTG
GCCAACGACG TCGCGGGCAT CGGCCTGTTC GAATCGGCGG AGGCGGCGGT GGGAGCCGTG
GTCGAGCTGA CCCCGGCCGG CCGGCTGGGC CAGGTCGAGG ACATGGCCGA CGCGGTGGTG
TTCCTGGCCT CCGACGCCGC CCGATTCATC ACCGGCGCCG GGCTGCCGGT CGACGGCGGG
ATGGGCATGT GA
 
Protein sequence
MTSIDLTGRT ALVTGGAQGL GEAMAIALAG AGATVMIADI QDSGEQTAKA LGPEHGFVKL 
DVTDEAAWDA AVTQTVAQLG GLDILVNNAG VEITSLITEV QVADIQKMLD VNVLGTTLGL
KHGLRAMRPG GVAGRGGAIV NVASVAATIA FPGIAVYSAT KSAVDRLTRV AAMESGKLGY
GVRVNCVYPG LVPTAMGIGL ANDVAGIGLF ESAEAAVGAV VELTPAGRLG QVEDMADAVV
FLASDAARFI TGAGLPVDGG MGM