| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4781 |
|---|
| Symbol | |
|---|
| ID | 8450411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5316593 |
|---|
| End bp | 5317390 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645043821 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003204046 |
|---|
| Protein GI | 258654890 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AGCCCGACGG GCCGGAGTCC GAACGCGCCG GTGGGGCCCC GGCGGTCACC
CGGGCCATTC GCATCCTGGA CCTGCTGGCC GAGCAGCGGG GCCAGACCCT GACGCTGTCC
GAGATCGCCC GCGGTCTGGG CCTGGCCAAG TCCTCGGTGT CCAACATGTG CGCGGCCCTG
GAGGAGGGCG GCCTGGTCCG CCGCACCGCG GCCGGGTACC TGCTCGGCCG GCGCACCGTC
GAGCTGGGCA GCGCCTACCT GTCCGGGTTC GACCAGATCC GCGAGTTCTA CCGGGTGTGC
GAGGAGTCCC CGATCCTGCG CCGGCAGCTG GTGCAGATCG CCATGCTCGA CGGCGCCCGG
GTGCTGTACC TGGCCGTGCA CGAAGGGCGC GAACGGTTCC CGCTGTCGGC GAGCGTGGGC
GACCGGTACC CGGCGTCGGC GACGGCCGTG GGCACCATCC TGCTCGCCGA GCTGACCCCC
GAGCGGGTGG CCGCGCTCTA CTGGGACCCG CGCGAGTTCG TCGGCTTCAC CGACCGCTCG
ACCGGCACCA TCGCCCAGCT GCAGGCCAAG CTGGCCGCCA CCCGGCAGCG CGGGTACGCG
CTGGACGAGG GGGAGGTGCA CGCGACGGTG CTCGGCATCG CCGTCCTCGT CCCGGGGTCC
GGCTCGGGCA ACCCGTCCTT CGGGCTCGGG GTGTCGATCG TGCATCCGAC CGGTTCCGAC
GACGAGCGCA CCACCATCCT GAGCGCGTTG CAGGAAGCGG CGGCCCGGCT GACCCGGCCC
CGGCTGCTGT CGGCATGA
|
|---|
| Protein sequence | MSDKPDGPES ERAGGAPAVT RAIRILDLLA EQRGQTLTLS EIARGLGLAK SSVSNMCAAL
EEGGLVRRTA AGYLLGRRTV ELGSAYLSGF DQIREFYRVC EESPILRRQL VQIAMLDGAR
VLYLAVHEGR ERFPLSASVG DRYPASATAV GTILLAELTP ERVAALYWDP REFVGFTDRS
TGTIAQLQAK LAATRQRGYA LDEGEVHATV LGIAVLVPGS GSGNPSFGLG VSIVHPTGSD
DERTTILSAL QEAAARLTRP RLLSA
|
|---|
| |