Gene Namu_4718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4718 
Symbol 
ID8450348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5252197 
End bp5253003 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID645043758 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003203983 
Protein GI258654827 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC GCATCGAGGT GCGCGATGCC GACGATCCGC GGCTGGCCGA TTTCCGCGAC 
CTGAAGCGGG CGGACCGGCG GCCGGACCGC CCCGGCGGCC GGGGATTGGT GATCGCCGAG
GGCACGGTGG TGGTGCGCCG GCTGCTGGCC TCGACCTATC CGGTGCGGGC GCTGATCGGG
GTCGCCCGCC GATTCGAGGA ATTGGCCGAC GACCTGGCCG ACGTGGATGT GCCCTATTAC
GTGGTCGACG CCGAATTGAT GGCCCAGGTC ATCGGATTTC ATCTCAATCG TGGCGTGTTG
GCCACCGCGG ACCGGGTCGC GCACCCGCCC GCCGCCGACC TGCTGGCCGG AGCGCGCTCG
GTGGCCGTGC TCGAAGGGGT CGGCGATCAC GAGAACCTCG GGTCGATCTT CCGCAATGCC
GCGGGACTGG GCATCGGGGC CGTCCTGCTG GCCGACGGTT GCGCCGATCC GCTCTACCGG
CGCAGCGTGC GGGTGTCCAT GGGCACCGTG CTGCACGTCC CGTTCGCGCC GTTGCCGTGG
CTCGACGAAG GAGTGGACCT GCTGCGGCGC AACGGGTTCC AGCTGATCGC ACTGACGCCG
GCCGGGGAGT GCCGGCTGGC CGACACCCGG GTGTCGGGTC GGGTCGCGCT GCTGGTCGGC
TCGGAAGGGC CGGGCCTGAC CGACGCGGCG ATGGCGGCGG CGGACCTGCG CGTCCGCATC
CCGATGCACC GGGGGATCGA TTCGCTCAAC GTGGCCACCG CCGCGGCCAT CGCCTTCGCC
GCGCTGACCG ATCCGGACCC CGATTGA
 
Protein sequence
MSTRIEVRDA DDPRLADFRD LKRADRRPDR PGGRGLVIAE GTVVVRRLLA STYPVRALIG 
VARRFEELAD DLADVDVPYY VVDAELMAQV IGFHLNRGVL ATADRVAHPP AADLLAGARS
VAVLEGVGDH ENLGSIFRNA AGLGIGAVLL ADGCADPLYR RSVRVSMGTV LHVPFAPLPW
LDEGVDLLRR NGFQLIALTP AGECRLADTR VSGRVALLVG SEGPGLTDAA MAAADLRVRI
PMHRGIDSLN VATAAAIAFA ALTDPDPD