Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4603 |
Symbol | |
ID | 8450231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5123391 |
End bp | 5124080 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645043644 |
Product | ABC transporter related |
Protein accession | YP_003203871 |
Protein GI | 258654715 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.609954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACCC TGGACGACGT CACCCTCACC TACCCCGACG GCGACGGACG GGTCACCGCC CTGGACCGGG TCGGCCTGAC CGGCCGGCCC GGCACCGTCA CCGGCATCAC CGGACCGAGC GGCTCGGGCA AGTCCAGCCT GCTCGCGGTG GCGGCCACCC TGGTCGCGCC GGACGCCGGC CGGGTCGTCA TCGACGGCGT CGACGCGGTC GGCCTGTCCG CCGCGGAGGC GTCCCGGCTG CGCCGGACCC GGATCGGCAT CATGTTCCAG CAGGCCAACC TGCTGCCGTC GTTGACCGCG TTGGAGCAGG TGCAGGTGAT GAACGAACTG GGCGAAGCCG GGTCCCGGGG CCGCCGGGGG GCGGTGCGCG AGCAGGCCCG CGAACTGCTG GCCGCGGTCG GCCTGGCCGG GTTGGAGGGC CGGCGCCCGC ACCAGCTCTC CGGCGGGCAG CGGCAGCGGG TCAATCTGGC CCGGGCTTTG GTCAACCAGC CGGCCGTGCT GCTGGTCGAC GAGCCGACCA GCGCGCTGGA CTCGGTGGCC GGGGCGGCCG TCGTCGAGCT GATCGTCCGG CTCACCGCCG AGCGGGGCAC CGCCACCCTG CTGGTCACCC ACGACCTGGA ACACCTGCCG CAGCTGGACG AGGCGGTGCA GCTGGTCGAC GGCCGGGTGA GCACGCCCGC AGCCGCCTAA
|
Protein sequence | MITLDDVTLT YPDGDGRVTA LDRVGLTGRP GTVTGITGPS GSGKSSLLAV AATLVAPDAG RVVIDGVDAV GLSAAEASRL RRTRIGIMFQ QANLLPSLTA LEQVQVMNEL GEAGSRGRRG AVREQARELL AAVGLAGLEG RRPHQLSGGQ RQRVNLARAL VNQPAVLLVD EPTSALDSVA GAAVVELIVR LTAERGTATL LVTHDLEHLP QLDEAVQLVD GRVSTPAAA
|
| |