Gene Namu_4603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4603 
Symbol 
ID8450231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5123391 
End bp5124080 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content75% 
IMG OID645043644 
ProductABC transporter related 
Protein accessionYP_003203871 
Protein GI258654715 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.609954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC TGGACGACGT CACCCTCACC TACCCCGACG GCGACGGACG GGTCACCGCC 
CTGGACCGGG TCGGCCTGAC CGGCCGGCCC GGCACCGTCA CCGGCATCAC CGGACCGAGC
GGCTCGGGCA AGTCCAGCCT GCTCGCGGTG GCGGCCACCC TGGTCGCGCC GGACGCCGGC
CGGGTCGTCA TCGACGGCGT CGACGCGGTC GGCCTGTCCG CCGCGGAGGC GTCCCGGCTG
CGCCGGACCC GGATCGGCAT CATGTTCCAG CAGGCCAACC TGCTGCCGTC GTTGACCGCG
TTGGAGCAGG TGCAGGTGAT GAACGAACTG GGCGAAGCCG GGTCCCGGGG CCGCCGGGGG
GCGGTGCGCG AGCAGGCCCG CGAACTGCTG GCCGCGGTCG GCCTGGCCGG GTTGGAGGGC
CGGCGCCCGC ACCAGCTCTC CGGCGGGCAG CGGCAGCGGG TCAATCTGGC CCGGGCTTTG
GTCAACCAGC CGGCCGTGCT GCTGGTCGAC GAGCCGACCA GCGCGCTGGA CTCGGTGGCC
GGGGCGGCCG TCGTCGAGCT GATCGTCCGG CTCACCGCCG AGCGGGGCAC CGCCACCCTG
CTGGTCACCC ACGACCTGGA ACACCTGCCG CAGCTGGACG AGGCGGTGCA GCTGGTCGAC
GGCCGGGTGA GCACGCCCGC AGCCGCCTAA
 
Protein sequence
MITLDDVTLT YPDGDGRVTA LDRVGLTGRP GTVTGITGPS GSGKSSLLAV AATLVAPDAG 
RVVIDGVDAV GLSAAEASRL RRTRIGIMFQ QANLLPSLTA LEQVQVMNEL GEAGSRGRRG
AVREQARELL AAVGLAGLEG RRPHQLSGGQ RQRVNLARAL VNQPAVLLVD EPTSALDSVA
GAAVVELIVR LTAERGTATL LVTHDLEHLP QLDEAVQLVD GRVSTPAAA