| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4238 |
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| Symbol | |
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| ID | 8449864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4706769 |
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| End bp | 4712306 |
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| Gene Length | 5538 bp |
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| Protein Length | 1845 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645043287 |
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| Product | polyketide-type polyunsaturated fatty acid synthase PfaA |
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| Protein accession | YP_003203516 |
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| Protein GI | 258654360 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase
[TIGR02813] polyketide-type polyunsaturated fatty acid synthase PfaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC CGGGCACCAC CACCAGACCG CCGATCGCCG TGGTCGGGGT GTCGGCGCTG
TTCCCGGGCT CGTCCGACGT CACCGGTTTC TGGCGGGACA TCCTGGCCGG GACCGATCGG
ATGACGCCGG TCCCGCCGAC CCACTGGCTG GTCGACGACT ACTTCGACGC CGACCCGGCG
GCGATCGACA AGACCTATGG CCGCCGGGGC GGCTTCCTGG ACCCGGTCGA TCTGGATCCG
ATCGCCTTCG GGGTGCCGCC CAGCGTGGTC CCGGCCACCG ACACCGCGCA GCTGCTGGCC
CTGATCGTGG CCCAGCAGGT GCTCGACGAC GCCGTTCGCG GCCAGTTCAC CGAGCTGGAC
CGCTCCCGGG TCTCGGTCAT CCTGGGCGTC ACCTCCGGGC AGGAGCTGCT GGGGGCGATG
GCCAGCCGGA TGAACCGGCC GATGTGGCTG CAGGGGATGC GCCGGGCCGG GGTCCCCGAG
GATGTCGCCC AGCGGGCCTG CGAGCAGATC GCCGACCTGC ACCCGGCCTG GGCCGAGAGC
ACCTTCCCGG GTCTGCTGGG CAACGTGGTC GCCGGCCGGG TGGCCAACCG GCTCAACCTG
GGCGGCACCA ACTGCGTCAC CGACGCCGCC TGCGCGTCCT CGTTCTCGGC GATCTCCATG
GGCATCAACG AGCTGTACCT GGGTGACAGC GACCTGGTCA TCTCCGGTGG CGTCGACACC
ATGAACGACA TCCTGATGTA CATGTGCTTT TCCAAGACGC CGGCGCTGTC GCGGACCGAG
GACATCCGGC CGTTCTCCGA TCAGGCCGAC GGAACCATGC TCGGCGAGGG CATCGGCATG
GTCGCGCTCA AGCGGCTGGC CGACGCCGAA CGCGACGGCA ACCGGATCTA CTGCGTGATC
AACGGGGTCG GCGCCAGCTC GGACGGCCGG GCCAAGAGCG TGTACGCACC GGTCCCGGCC
GGGCAGGCCC GGGCGATCGA GGCGGCCTAC GCCAAGGCCG GCTACGGTGC CGACACGGTC
GAGCTGGTCG AGGCCCACGG CACCGGCACC GTCGCCGGCG ACGCGGCCGA GTTCGCCGGC
CTGGAAACAG TTTTCAACGC CACCGGGCGC GCCGACCGGC AGTGGTGCGC GCTGGGTACG
GTCAAGAGCC AGATCGGCCA CACCAAGGCG GCGGCCGGTG CGGCCGGGCT GATCAAGACG
ATCATGGCCT TGCAGCACCG CGTGCTGCCG CCGACGGCCA AGGTGCAGCG GCCCAACCCA
AAGTTGGACC TGGGCGCCTC CCCGTTCCAC CTGACCACCA GAGCGCTGCC CTGGGTGCGG
GATTCGGCGC ATCCGCGCCG AGGATCGGTC AGCTCCTTCG GGTTCGGCGG CTCCAACTTC
CACATCGCCC TGTCCGAGTA CACCGGCTCG GGCAACCGGG CGCCCCGCCG GCGCACCAGC
GACGTCGAAC TGCTGGTGTT CAGCCGTGCC GATGCGGCGG CGATCGCGGC CGAGCTCGAA
CAGGTCCGGC AGGGACTGGA GAATGCCGAC GGTCCCGCTG ATCTGGCCCG CCTCGCGTGG
GACAGCCAGC GCCGCTTCGA TTCCGGGGCG GCCAGCCGGC TGTCCGTGCT GGTCACCGTG
ACCGCCGGGG CCGCGGACCT GCGGGCCAAA CTGGACCAGG CGATCGGGCT GCTGCGCCGC
AGTCCGGCCG CCGCGTTCCA GACCCCGACC GGCATCGCCT ACGGCACCGG CGCCCCCGCC
GGCGAGCTGG CCTTCCTGTT CCCCGGGCAG GGCAGCCAGT ACCCGTTCAT GGGGGCCGAC
CTGGCCATGC AGTTCGGGGC GGCCATCGCC GCCTGGGACG CCGCCGCCGA CGCCTGTGAC
GGACCGGAGC CGTTGCCCGG CCTGGTCTTT CCCGTCCGCA CCTTCGCCGA CGACGAGCCG
GTTGCGCAGC GGGAACGGCT GACCGCGACG CAGTGGGCGC AACCGGCGAT CGCCGCGACC
AGCCTGTCGA TGCTGCGGGT GCTGGACGCG ATCGGGGTCC GGGCCGACCA CGTCGCCGGG
CACAGCTTCG GCGAGATCAC CGCGCTGCAC GCGGCCGGGG CGCTGTCCGC GGCCGACGCG
GTGCGGGTGG CCCGCCGCCG GGGCGAACTG ATGGCCCAGG CCGCGCAGAT CCCGGGCGCG
ATGACCGCGG TCGTCGCCGG CCTCGACCAG CTGCGGGAGC TGGTCGACGC GTCGGCCGAC
GTGGTGATCG CCAACCACAA CAGCCCGACC CAGGTGGTGC TGTCCGGCCC GACCAGCGCG
ATCGAACGGG TCGAGGGCGA GCTGGGCCGG CTGGGCCTGA CCTTCCGCCG GCTGCCGGTC
GCGACCGCCT TCCACTCGTC GGTCGTCGAC GGGGCCGGCG CCGCCTTCAC CGAGTACCTG
GCCACGGTCG ACGTGCGCCC GCCGGTCGCC GTGGTGCACG CCAACGAGAC GGCCGCGCCC
TACCCGACCG AGGCCGACGC CGTGCGCGCC CAGCTGGGGC GTCAGCTCAC CCGGCCGGTG
CGGTTCGTGG AGCTGATCGA GGGCATGTAC GCCCGCGGCG TGCGGACCTT CCTGGAGGTC
GGCCCGTCCT CGGTGCTCAC CGGGCTGGTC GACGCCATCC TGGGCGAGCG CGACCACCGG
GCCATCGCTC TGGACAACCG GACCAAGGGC GGGCTCGGCG CCTTCCTCGG CGGCCTGGGC
CAACTCGCCG CCGCCGGGGT GGCCATCGAC TTCGCCCCGC TGTGGGCCGA GTACGGCTCA
CCGGCCGACG AACCGGCCGC GGTCAAGCCC GGTTTCACGA TCCCGATCAA CGGGGCCAAT
TACGGCAAGC CGTACCCCGG CGACCTGGCC GAGCTGGTCG GCCCGAACCC GGACTCGGGG
TCCGTCCCGG TCACGCCGCC CGCGCCGCCA TCGGTGCCGG TGGCGCCCGT CCCGGTTGCC
CCGGTCCCGG CTCCACCGCC GGCCGTCCCC GCTGCCGCGA TGCCCGCCGC CCCACCCCGA
TCGGAGCCTG TCGTGTCCGC GACCCCGCCC GCTGTGCCGT CCCCGTTGCC GTCGGCGCCG
CCGAGCCCGG CCGGCGGGCC GTCGGACGAG GTGTTGGCCG TCTACCAGGC CGTGCAGCTG
CAGACCGCGC AGGCGCACAC CGCGTACCTG AACACCGTCG CCCAGGCCCA CGGCGCGTTC
CTGCAGACCG CGCAGCAGAG TCTGGCCGCG GTCGGCTGGC TGGCCGGTGC CGAGACCGGA
CTGCTTCCGG CCGCCCCCGT GGCCGCCGGT GTGGCCGCTG ACGCCCCGGC GCCGGTGATC
GCCGCCCCGG CCGTTCCGGC GCCGCCGGCT CCCAGTGCGG CGCCGTCCGC TCCCGTGCCG
CCCCCGGCGC CGGTCGTCGC GGTGCCGCCG CCGACCCCGC CGGCCCCGTC TGTGCCCAGC
GCGGCGCCGG CGCCGGCCTC GATCGAGGTG GTTGCGGGGG CGGGTCCGTC GTTGGCGGAG
GTGACGTCGG CGTTGGTCGC GGTGGTGGCG GACAAGACGG GGTATCCGGC GGAGATGTTG
TCGTTGGAGA TGGAGCTGGA GTCGGATCTG GGGATTGATT CGATCAAGCG GGTGCAGATT
CTGAGTGCGA TGCAGGATCG GATGCCGCAG TTGCCGGTGG TGGATGCGTC GGCGATGGCG
CGGTTGTTGA CGTTGCGGCA GATCGTGGAC CGCTTGGCCG AGGAGCTGGG CGAGCCGGCG
GTGCCGGTGG CGCCGGGCCC GGTCGAGGTG GTTGCGGGGG CGGGTCCGTC GTTGGCGGAG
GTGACGTCGG CGTTGGTCGC GGTGGTGGCG GAGAAGACGG GGTATCCGGC GGAGATGTTG
TCGTTGGAGA TGGAGCTGGA GTCGGATCTG GGGATTGATT CGATCAAGCG GGTGCAGATT
CTGAGTGCGA TGCAGGATCG GATGCCGCAG TTGCCGGTGG TGGATGCGTC GGCGATGGCG
CGGTTGTTGA CGTTGCGGCA GATCGTGGAT CACCTGGCCG AGGAGCTCGG CGAACCCGTT
GCACAGGCTG TTTCCGCCGA GCCGGCCCGG ATCGACCAGG GCCCCGGTCC CGAACTCGGC
CGGCTGGTCA CCGAAGCGGT CGAATCGTCC GGGTCCGGCG CCGGTGCCCT GGCCGGGCTC
GGCGGCCGCG TCGCCGTGAC CGACGACGGC GGCGGCGTCG GCGCCGCCCT GGTCGACGTG
CTCACCGGCC ACGGGCTGGA CGCCGAACTC GTCGGCGAGC TGACCGGCAA CGGCTACGCG
GGGGTGGTCT TCCTCGGCGG GCTGCGCGCG CTGACCGACG TCACCGACGC CGCCGCGGTC
AACACCGAGG CCTTCCGGGC CGCCCGCGCG GCCGGCTCGA CCAGCGAGTC CTTCGTCACC
GTCAGCGATC TCGGCGGTTC CTTCGGCCGG GACGATCTGG ACCCGACCCG GGCCTGGACG
TCCGGTCTGA CCGGTCTGGT GCGCACCGCC GCGCTGGAAT GGCCGGCCAC TCGGGTGCAG
GCGATCGACA TCCAACGGGC CGCCCGCGGC CCGCAGGACG TGGCCCGGGC CATCGGCGAC
GAGCTGCTGC GCGGCGGTCA GGAGATCGAG GTCGGCATCC GGGCCGACGG CACCCGGCTG
ACCCTGAGCA GCGTGCCCGC GCGGGTCGAC GGCGGAGCGA TGCCGCTGGG CCCCGACGAC
GTCATCGTCG CCTCCGGCGG CGGGCGCGGC GTCACCGCAG CCACCATGGT CGAGCTGGCC
CGGGCCACCC GGGCCCGTTT CGTCCTGCTC GGCCGCTCGC CGCTGGACCC GGAACCGGCG
GTCTGCGCCG GCGCCGCCGA CGACGTCGCG CTCAAGCGGG CGCTGCTGGA CGACGCGACC
GCCCACGGCC GCACCGTCAC CCCCGCCGAG CTAGGCCGGC AGGTCCGGGC CATCCTGGCC
AACCGCGAGA TCCGGCAGAC CCTCGAGCAG ATCGAGGCCG CCGGCGGCCA GGCCCGTTAC
CTGGCCGTCG ACGTCACCGA CGCGGACGCC GTCGCCCAGG CGCTGCAACG GGTCCGGCAG
GAGGTCGGAC CGATCACCGG CGTGGTGCAC GGCGCCGGTG TGCTGGCCGA CCGGCGCATC
GTGGACAAGA CCGACGCGCA GTTCGACGCC GTGTTCCGGA CCAAGGTGCA GGGCCTGCGC
TCGCTGCTGG CCGCGACCGC CGCCGACGAG TTGCGACTGC TCTGTGTCTT CTCCTCGGTG
GCCGCCCGGA CCGGGAACGA GGGCCAGGCC GACTACGCGA TGGCCAACGA GGTGCTCAAC
AAGGTCGCGG TGGCCGAACG GACCCGCCGC GGACCGGGTT GCATCGTCAA GTCCTTCGCC
TGGGGGCCGT GGTCCGGCGG CATGGTCGAC GACGCGCTGG CCCAGCGGTT CCGGTCGATG
GGGGTTGCGT TGCTGCCGCT GGACGTGGGC GCCGCGATGT TCGTCGCCGA GATCGCCAGC
CCGCAGGTCG ACCAGGTCGA GGTGATGATC GGTAGCGCGA CCCTAGGCGC GCCGGCGGCA
GCGAGCCGAG GCGCATGA
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| Protein sequence | MSQPGTTTRP PIAVVGVSAL FPGSSDVTGF WRDILAGTDR MTPVPPTHWL VDDYFDADPA
AIDKTYGRRG GFLDPVDLDP IAFGVPPSVV PATDTAQLLA LIVAQQVLDD AVRGQFTELD
RSRVSVILGV TSGQELLGAM ASRMNRPMWL QGMRRAGVPE DVAQRACEQI ADLHPAWAES
TFPGLLGNVV AGRVANRLNL GGTNCVTDAA CASSFSAISM GINELYLGDS DLVISGGVDT
MNDILMYMCF SKTPALSRTE DIRPFSDQAD GTMLGEGIGM VALKRLADAE RDGNRIYCVI
NGVGASSDGR AKSVYAPVPA GQARAIEAAY AKAGYGADTV ELVEAHGTGT VAGDAAEFAG
LETVFNATGR ADRQWCALGT VKSQIGHTKA AAGAAGLIKT IMALQHRVLP PTAKVQRPNP
KLDLGASPFH LTTRALPWVR DSAHPRRGSV SSFGFGGSNF HIALSEYTGS GNRAPRRRTS
DVELLVFSRA DAAAIAAELE QVRQGLENAD GPADLARLAW DSQRRFDSGA ASRLSVLVTV
TAGAADLRAK LDQAIGLLRR SPAAAFQTPT GIAYGTGAPA GELAFLFPGQ GSQYPFMGAD
LAMQFGAAIA AWDAAADACD GPEPLPGLVF PVRTFADDEP VAQRERLTAT QWAQPAIAAT
SLSMLRVLDA IGVRADHVAG HSFGEITALH AAGALSAADA VRVARRRGEL MAQAAQIPGA
MTAVVAGLDQ LRELVDASAD VVIANHNSPT QVVLSGPTSA IERVEGELGR LGLTFRRLPV
ATAFHSSVVD GAGAAFTEYL ATVDVRPPVA VVHANETAAP YPTEADAVRA QLGRQLTRPV
RFVELIEGMY ARGVRTFLEV GPSSVLTGLV DAILGERDHR AIALDNRTKG GLGAFLGGLG
QLAAAGVAID FAPLWAEYGS PADEPAAVKP GFTIPINGAN YGKPYPGDLA ELVGPNPDSG
SVPVTPPAPP SVPVAPVPVA PVPAPPPAVP AAAMPAAPPR SEPVVSATPP AVPSPLPSAP
PSPAGGPSDE VLAVYQAVQL QTAQAHTAYL NTVAQAHGAF LQTAQQSLAA VGWLAGAETG
LLPAAPVAAG VAADAPAPVI AAPAVPAPPA PSAAPSAPVP PPAPVVAVPP PTPPAPSVPS
AAPAPASIEV VAGAGPSLAE VTSALVAVVA DKTGYPAEML SLEMELESDL GIDSIKRVQI
LSAMQDRMPQ LPVVDASAMA RLLTLRQIVD RLAEELGEPA VPVAPGPVEV VAGAGPSLAE
VTSALVAVVA EKTGYPAEML SLEMELESDL GIDSIKRVQI LSAMQDRMPQ LPVVDASAMA
RLLTLRQIVD HLAEELGEPV AQAVSAEPAR IDQGPGPELG RLVTEAVESS GSGAGALAGL
GGRVAVTDDG GGVGAALVDV LTGHGLDAEL VGELTGNGYA GVVFLGGLRA LTDVTDAAAV
NTEAFRAARA AGSTSESFVT VSDLGGSFGR DDLDPTRAWT SGLTGLVRTA ALEWPATRVQ
AIDIQRAARG PQDVARAIGD ELLRGGQEIE VGIRADGTRL TLSSVPARVD GGAMPLGPDD
VIVASGGGRG VTAATMVELA RATRARFVLL GRSPLDPEPA VCAGAADDVA LKRALLDDAT
AHGRTVTPAE LGRQVRAILA NREIRQTLEQ IEAAGGQARY LAVDVTDADA VAQALQRVRQ
EVGPITGVVH GAGVLADRRI VDKTDAQFDA VFRTKVQGLR SLLAATAADE LRLLCVFSSV
AARTGNEGQA DYAMANEVLN KVAVAERTRR GPGCIVKSFA WGPWSGGMVD DALAQRFRSM
GVALLPLDVG AAMFVAEIAS PQVDQVEVMI GSATLGAPAA ASRGA
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