Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4208 |
Symbol | |
ID | 8449834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4651179 |
End bp | 4653209 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645043257 |
Product | hypothetical protein |
Protein accession | YP_003203486 |
Protein GI | 258654330 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.109331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGT CGACCAGCGC GGCGCCCACC GCGTCGGGCC CTGGCACCGG CCTTCGGGCC CGGTACTCGG GATGGGTCGA GCCCGCCCCG ACCGGCCTGC CGCGCTGGCG GGTGGTGTGC GCGCTGCCCG TCGTGCTGTC GTTCGCCTTC GTGCTCCTGG TCTCCCTGGG CATCACCGGG TCGTCGACCG GGGCCTGGTG GCGCTTCTTC GGTACCGGTA CCGACCCTGA CCTTCTGCTT GGCGCGCCCC GCGAGATTCG CAGTGACGAA TGGTTGGTCC AGTCCAGCTG GGTCATCTCC CAGGTCCAGC AGGGATTCCC GCTGTTCAAC CACACCTTCC CGGGCGGGAT GGACGCCAGC GTGCAGAACG ACCTGCCCGT GTGGGACTGG TCGGCCCTGT TCCGGCCGCA CACCCTGGGC TTTCTCGTGC TGCCCCTGGA CCAGGGCATG GCGGTGCGGT GGTGGCTGCC CGGGTTGTCG CTGATCGCCG CCGCCTACCT GCTGCTGGTC ACCCTTATGC CGCGCCGCCC GATCAGTGCC GCGGTCCTGG CCGGATGCTT CTTCCTCTCC CCGTTGATCC AGTGGTGGTT CCTACCCACC ACGATCTGGC CCCCGACCTG GGCATTCCTG TCGATGACGG CGGTGATCTG GGCGGTCCGG GACCCTCGGC CATGGGTGCG CATCCTGCCC GCCGCCGGAG CCGGCTATCT GGCCGTCACC ATGGTGATGA GCATCTACGT GCCGTTCATC GTGCCCGCCG CTCTGGTGTT CGGAATCGTC GCGGTGGGTG TGTTCGTGCA GGCCTGCGGT CGGGATCGGC TGGGCCTGCG GCGGGCCGCG GTACGTCTGG TTCCGCTGGT GGTGGCCGGT GTCGCGGCGG TCGCGGTCAT CGGCCTGTGG GTGCTCACCC GGCGGGAGAC CATCACCGCG CTGCTGTCCA CCGTGTATCC CGGTCAGCGT CTGGAGGCGA CCGGAACGGT TGACGGGCAC GGGCTCGTCG CGTTGTTCGC CGGGCCGTTC GACGAATCTC TGACCTCGGG CGGGACCGTG ATCCTGGGCC CGAACGCGTC CGAGTCGGCC ACCCCCCTGC TCGCCGGGCT CTTCCTGCTC GTCCCGTTGA TCTACTTCGT CGTCCTCGAC TGGCGCCGGG ATCGGTACCT GCACTGGCCG ATGCTGGCGG TCATCGCCGG CACCGCCCTG TTCCTGGCCT TCATGCTGGT GCCGGGGTGG GATTTTCTGG CCCACCTGAT CTTCATCGAC CGAAGCCCCG CCACCCGGGC GCGGATGGGC CTGGCCATCC TCGACCTGCT GTGCGTTGCG CTGCTGGTGC GCCGGCTGGA CCGGCCCGGC ACGCGGCTGC CATGGGCGGT CAGCATCGTC ACCGCGGTGC TCGCGGCCGG CAGCCTGGTC CTGGTCTGGC TGACCCTGCG GTCCACCTCC GACCCCGGGC TGGTGAACGC CGAGCACTGG AAGGTGCTCG CCGTCTTGTT CGTGTTCGCC ACCTTCGCCT TCACCCGCCA GTGGGTCGGG GTGGCCGCGG CCGCGCTGGC CGTGGTCGCC CTCGCGACGG GGGGTGTGGT GAACCCGGTT TACCGGGGTG TCTTCGATCT GACCGACACG GCCGTCGGCC AGCAGATCCA AGACGTGAAT GCGCCGGCGC CCGGCAGCTG GGTCGGGATC GGCGATTTCG CCCCGACCGG CCTGCTGGTC CAGTCCGGAG TTCAGGCCTA CAACGGGGTG CAGACGTACC CGCCGGCATT GATGTGGCAG CAGATCGATC CGACCGGGCA GTACGAGTAC CAGTGGAATC GGCTCGCCAA CGTCGGTTGG ACGCCCGGCG TCGGCGCGCC TGTCGTCCAG AATCCGGCCC GGGACCAGAT TATGGTGACC TTCGATTCGT GCTCCGATTT CGCCCGCGAC CACGTCGACT ATGTCCTGAC GACCACACCG CTCGACCAGG CCTGCCTGCG CGAGCTGCAC GACATCACCG AAGGTCCGAC CGAATTCTGG ATCTATGGAG TCGACAAATG A
|
Protein sequence | MTESTSAAPT ASGPGTGLRA RYSGWVEPAP TGLPRWRVVC ALPVVLSFAF VLLVSLGITG SSTGAWWRFF GTGTDPDLLL GAPREIRSDE WLVQSSWVIS QVQQGFPLFN HTFPGGMDAS VQNDLPVWDW SALFRPHTLG FLVLPLDQGM AVRWWLPGLS LIAAAYLLLV TLMPRRPISA AVLAGCFFLS PLIQWWFLPT TIWPPTWAFL SMTAVIWAVR DPRPWVRILP AAGAGYLAVT MVMSIYVPFI VPAALVFGIV AVGVFVQACG RDRLGLRRAA VRLVPLVVAG VAAVAVIGLW VLTRRETITA LLSTVYPGQR LEATGTVDGH GLVALFAGPF DESLTSGGTV ILGPNASESA TPLLAGLFLL VPLIYFVVLD WRRDRYLHWP MLAVIAGTAL FLAFMLVPGW DFLAHLIFID RSPATRARMG LAILDLLCVA LLVRRLDRPG TRLPWAVSIV TAVLAAGSLV LVWLTLRSTS DPGLVNAEHW KVLAVLFVFA TFAFTRQWVG VAAAALAVVA LATGGVVNPV YRGVFDLTDT AVGQQIQDVN APAPGSWVGI GDFAPTGLLV QSGVQAYNGV QTYPPALMWQ QIDPTGQYEY QWNRLANVGW TPGVGAPVVQ NPARDQIMVT FDSCSDFARD HVDYVLTTTP LDQACLRELH DITEGPTEFW IYGVDK
|
| |