| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4102 |
|---|
| Symbol | |
|---|
| ID | 8449725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4529061 |
|---|
| End bp | 4530212 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645043148 |
|---|
| Product | Aminocarboxymuconate-semialdehyde decarboxylase |
|---|
| Protein accession | YP_003203380 |
|---|
| Protein GI | 258654224 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.13287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0312348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGTG CCGCCGGGCG GTGGCACAGC GACGCCGGCG CGGAGCCGGC CGTCCAACCG
AACACGTGGG AGGTCGCGTT GACGAGCTCG AATCCGGCGG ACACGTCCGT CACTGCAGGA
TCGACGGCGG CCGGATCGAC GGCGGCCGCA CCGACCGGGC CGCGGGTGGT CGACGTCCAT
GCGCATGCGA TGCCGATGCC GCTGCTGCGC AGCCTGGCCG ACCGCGGCCT GGCCGACGTC
TCCGCGGTCG ATCAGGGCAT CGTCCGGCTC GACCCGAAGG TCAGCGGCGT GGGTCCGGGA
GCTCCGCTGC CGCTGGCCCG CTCCCAGCAC GACGTGGCCA CCCGGCTGGT CGAGATGGAC
GCGGCCGGCG TCGACGTGCA CGCGGTGTCG TTGCCGCCGT TCCTGTTCGC CACCAACGCC
GACGACGCGG GCTTCGCCAC CGGCATCGTG GCCCAGGGCA ACGACGAGCT GGCCGGCTAC
GTCGCCGGCG CCCCCGATCG GTTGGTCGGC CTGGGCTACG TGCCGCTGGG CTGGCCCGGG
GTGGCCGACG AGGCGGTACG CGTGCTCGAC GAGCTGGGCC TGGCCGGCAT CGCGATCGGC
AGCCAGGGCG GCGGCAAGGA TCTGGACGAT CCGGTGAACG AGGATCTGTG GGCGTTGCTG
GCCGAGCGGA ACACCTTCGT GTTCCTGCAC CCGTCGGGCA TGCCGGCCGG TCCGCGACTC
AAGGACTACT GGATGCCGCA GCTGGTCGGG TATCCGATGG AGACGGCGAT CGCGGTGGCC
CGGCTGGTGT TCAGCGGCAC CCTGGAGCGG TACCCGATCA CCCTGTGCCT GGCCCACGGC
GGCGGCTGCG TGCCCTCGCT GCGCGGGCGG ATGGACATGG GCTGGGAGCG CAAGGACGTC
GCCCACACCA ACGACCACCC GCCGACCCAC TACACCGATC GGCTCTACTA CGACACGGCG
GTGTTCAACA CGACCGTGCT GAGCCGGATC GTGCAGGACG TGGGCGTCGA GCACGTGCTG
ATGGGTACCG ACCACCCGTT CGAGCTGGGC GATCCGACGC CGCGAAAGAC CGTGGGCGAC
CTGGGGCTGA GCGAGGCGGA CACCGCGGCC ATCCTGGGCG GCACGGCCAG CCGGTTGCTC
GGGTTGGCCT GA
|
|---|
| Protein sequence | MIGAAGRWHS DAGAEPAVQP NTWEVALTSS NPADTSVTAG STAAGSTAAA PTGPRVVDVH
AHAMPMPLLR SLADRGLADV SAVDQGIVRL DPKVSGVGPG APLPLARSQH DVATRLVEMD
AAGVDVHAVS LPPFLFATNA DDAGFATGIV AQGNDELAGY VAGAPDRLVG LGYVPLGWPG
VADEAVRVLD ELGLAGIAIG SQGGGKDLDD PVNEDLWALL AERNTFVFLH PSGMPAGPRL
KDYWMPQLVG YPMETAIAVA RLVFSGTLER YPITLCLAHG GGCVPSLRGR MDMGWERKDV
AHTNDHPPTH YTDRLYYDTA VFNTTVLSRI VQDVGVEHVL MGTDHPFELG DPTPRKTVGD
LGLSEADTAA ILGGTASRLL GLA
|
|---|
| |