Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4021 |
Symbol | |
ID | 8449640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4436930 |
End bp | 4437982 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645043066 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003203302 |
Protein GI | 258654146 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.613602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.127498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGGCG CGACGGGTGG GGCCGCCGAC GATGTCGGCG TGCGCCGTGG CGCGCCCACG CTCGAGGACG TGGCCAGCGC GGCCGGGGTG TCCCGGTCCA CCGCGTCCCG GGCGATCAAC GGCGAGGCCA AGGTCAGCCC CCGCGCGCGG GCCGCGGTCG AGGCGGCCGT GCTCCAGCTC GGGTTCACCC CCAATCAGGC GGCTCGCACC CTGGTCACCC AACGGACCAA TGCGGTCGCC CTGGTGGTGC CCGAGCCCGA CGAGCGGGTG GTGGCCGACC CGTTCTTCTC CGCCGCCGTG CAGGGCCTGT CCCAAGCTCT GGCCGACTCC GACCTGCAGT TGGTGTTGTT GATGGCCGGC CTGGCCGGCT CACCGGAACG GGCCGTGCAC TACCTGCGGC ACGGGCACGT CGACGGCGCG GTCGTGGTGT CCCACCACCA GGCCGACGAC ATCGAGCGGG TGCTGGTCGC CTCGGGGATG CCCAGCGTGT TCGTCGGCCG CCCCTGGAAC CTGCCGGACC AGCTGCATTA CGTGGACACC GACAACCGGC GGGGCGGCGA GCTGGCCACC GAGCATCTGA TCGCCCGGGG CCGCCGGCGC ATCGGCACGG TCGCCGGCCC GGCGGACATG ACCGCCGCCT ACGACCGGCT GGCCGGCTGG CGATCGGCCC TGGCCGCGGC CGGGCTGCCG GCCGACGCGG TCGAGTACGG CGACTTCACC ACCGAGGGCG GCGCAGCGGC GATGCGGCGG CTGCTGGCCC GCCGGCCCGA CCTGGATGCG GTGTTCGTGG CCTCGGATCT GATGGCCGCC GGCGCGCTGG CCGTGCTGCG GGCGGCCGAG CGGAGCGTGC CCGGCGACAT CGCCGTCGTC GGCTACGACG ACTCAGCGGT CGCCGCCGTC ACCGACCCGC CGCTGACGAC GGTGATCAAC CCGGTGGCCA CGATGGCCCG GACGGCGGGC GGCATCCTGC AGCGGTGGCT CACCGACCCG GAGCCGCCCG ACCGCGGGCC GGTCGTCTTC CCGCCCGAGA TGGTCGTCCG GACGTCCGCC TGA
|
Protein sequence | MRGATGGAAD DVGVRRGAPT LEDVASAAGV SRSTASRAIN GEAKVSPRAR AAVEAAVLQL GFTPNQAART LVTQRTNAVA LVVPEPDERV VADPFFSAAV QGLSQALADS DLQLVLLMAG LAGSPERAVH YLRHGHVDGA VVVSHHQADD IERVLVASGM PSVFVGRPWN LPDQLHYVDT DNRRGGELAT EHLIARGRRR IGTVAGPADM TAAYDRLAGW RSALAAAGLP ADAVEYGDFT TEGGAAAMRR LLARRPDLDA VFVASDLMAA GALAVLRAAE RSVPGDIAVV GYDDSAVAAV TDPPLTTVIN PVATMARTAG GILQRWLTDP EPPDRGPVVF PPEMVVRTSA
|
| |