Gene Namu_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4021 
Symbol 
ID8449640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4436930 
End bp4437982 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content75% 
IMG OID645043066 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003203302 
Protein GI258654146 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.613602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.127498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGCG CGACGGGTGG GGCCGCCGAC GATGTCGGCG TGCGCCGTGG CGCGCCCACG 
CTCGAGGACG TGGCCAGCGC GGCCGGGGTG TCCCGGTCCA CCGCGTCCCG GGCGATCAAC
GGCGAGGCCA AGGTCAGCCC CCGCGCGCGG GCCGCGGTCG AGGCGGCCGT GCTCCAGCTC
GGGTTCACCC CCAATCAGGC GGCTCGCACC CTGGTCACCC AACGGACCAA TGCGGTCGCC
CTGGTGGTGC CCGAGCCCGA CGAGCGGGTG GTGGCCGACC CGTTCTTCTC CGCCGCCGTG
CAGGGCCTGT CCCAAGCTCT GGCCGACTCC GACCTGCAGT TGGTGTTGTT GATGGCCGGC
CTGGCCGGCT CACCGGAACG GGCCGTGCAC TACCTGCGGC ACGGGCACGT CGACGGCGCG
GTCGTGGTGT CCCACCACCA GGCCGACGAC ATCGAGCGGG TGCTGGTCGC CTCGGGGATG
CCCAGCGTGT TCGTCGGCCG CCCCTGGAAC CTGCCGGACC AGCTGCATTA CGTGGACACC
GACAACCGGC GGGGCGGCGA GCTGGCCACC GAGCATCTGA TCGCCCGGGG CCGCCGGCGC
ATCGGCACGG TCGCCGGCCC GGCGGACATG ACCGCCGCCT ACGACCGGCT GGCCGGCTGG
CGATCGGCCC TGGCCGCGGC CGGGCTGCCG GCCGACGCGG TCGAGTACGG CGACTTCACC
ACCGAGGGCG GCGCAGCGGC GATGCGGCGG CTGCTGGCCC GCCGGCCCGA CCTGGATGCG
GTGTTCGTGG CCTCGGATCT GATGGCCGCC GGCGCGCTGG CCGTGCTGCG GGCGGCCGAG
CGGAGCGTGC CCGGCGACAT CGCCGTCGTC GGCTACGACG ACTCAGCGGT CGCCGCCGTC
ACCGACCCGC CGCTGACGAC GGTGATCAAC CCGGTGGCCA CGATGGCCCG GACGGCGGGC
GGCATCCTGC AGCGGTGGCT CACCGACCCG GAGCCGCCCG ACCGCGGGCC GGTCGTCTTC
CCGCCCGAGA TGGTCGTCCG GACGTCCGCC TGA
 
Protein sequence
MRGATGGAAD DVGVRRGAPT LEDVASAAGV SRSTASRAIN GEAKVSPRAR AAVEAAVLQL 
GFTPNQAART LVTQRTNAVA LVVPEPDERV VADPFFSAAV QGLSQALADS DLQLVLLMAG
LAGSPERAVH YLRHGHVDGA VVVSHHQADD IERVLVASGM PSVFVGRPWN LPDQLHYVDT
DNRRGGELAT EHLIARGRRR IGTVAGPADM TAAYDRLAGW RSALAAAGLP ADAVEYGDFT
TEGGAAAMRR LLARRPDLDA VFVASDLMAA GALAVLRAAE RSVPGDIAVV GYDDSAVAAV
TDPPLTTVIN PVATMARTAG GILQRWLTDP EPPDRGPVVF PPEMVVRTSA