| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4000 |
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| Symbol | |
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| ID | 8449619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4417056 |
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| End bp | 4417880 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645043045 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_003203281 |
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| Protein GI | 258654125 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.000381364 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.197176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATC CGTTCACCAA GGCGTGGAAG TACTTGATGG CGCTGTTCTC GTCCAAGGTC
GACGAATACG CCGATCCGAA GGTTCAGATC CAGCAGGCCA TCGAGGATGC CCAGCGCCAG
CACGCCGCGC TGTCCCAGCA GGCCGCCGCG GTCATCGGCA ACCAGCGGCA GCTGGAGATG
AAGCTGACCC GGCAGATGGG TGACGTCGAG CGACTCTCGT CCTCGGCCCG GCAGGCACTG
GTGCTGGCCG ACGAGCAGCG GGCCAAGGGC AATGCGGCCG AGGCGGACAA GTACGAGCAG
ACCGCGCAGG CCTTCGCCAC GCAGTTGGTC GCCGCCGAGC AGCAGATGGA AGACCTGAAG
AAGATGCACG ATCAGGCTCT CCAGGCGGCG CAGCAGGCCA AGAAGGCGGT GGAGAACAAC
GCCATGCAGC TGCAGTCCAA GCTGGCCGAG CGCACCAAGC TGCTCTCCCA GCTGGAGCAG
GCCAAGATGC AGGAGCAGGT GTCGGCCTCG CTGCAGTCCA TGTCGCAGTT GCAGGCTCCT
GGCAACACCC CGTCGCTGGA CGAGGTCCGG GAGAAGATCG AGCGGCGCTA CGCGAACGCG
CTCGGCGCGG CCGAGCTGCA TTCGGACTCG GTCGAGGGCC GGATGCTCGA GGTGCAGAAG
TCGACGCTGG ACATGGCCGG CTCGGCCCGG CTCGATCAAC TGCGGGCCCA GCTGCACCCT
GAGCTGGCCA GCCAGCAGCC CCGATCCATC GACGCGGCCA CGGCGGCGCC CGCGAACCCG
GCGGTGGCGC CGGCCGCGCA GCCGTTGCCC AACCAGCAGA CCTGA
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| Protein sequence | MANPFTKAWK YLMALFSSKV DEYADPKVQI QQAIEDAQRQ HAALSQQAAA VIGNQRQLEM
KLTRQMGDVE RLSSSARQAL VLADEQRAKG NAAEADKYEQ TAQAFATQLV AAEQQMEDLK
KMHDQALQAA QQAKKAVENN AMQLQSKLAE RTKLLSQLEQ AKMQEQVSAS LQSMSQLQAP
GNTPSLDEVR EKIERRYANA LGAAELHSDS VEGRMLEVQK STLDMAGSAR LDQLRAQLHP
ELASQQPRSI DAATAAPANP AVAPAAQPLP NQQT
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