Gene Namu_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3912 
Symbol 
ID8449531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4318312 
End bp4319034 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID645042958 
ProductABC transporter related 
Protein accessionYP_003203194 
Protein GI258654038 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.478382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0640135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCTTC GTCTCTCGGA TGTCTCCGTG CGCATCGCCG GGTCGCACAT CCTGCACGGC 
ATCGATCTTG AGGTGGCCGA GGGCGGGGTG ACCGCGCTGC TGGGCCGCAA CGGCGTGGGC
AAGTCGACCA CGCTCAAGGC GATCCTGGGT ATCGTGCCGG CCACCGGCAC CATCGAGTTC
GACGGCCGTG ACATCGCCGG GCAACCCACC CACAAGATCG TGCGGGCCGG CATCGGCTAC
GTGCCCGAGG ACCGGGACGT GTTCGCCGGC CTGACCGTGG CCCAGAATCT GGAACTGGCC
GAACAACCGG GTGTTGACCC CGACTACGAC ACCGTGCACG ACCTGTTTCC CGAACTGCTG
GAGCGGCGCA AGCAGCGGGC CGGAACGCTG TCCGGCGGCC AGCAGCAGAT GGTCGCGCTG
GCCCGGGTGA TGCTCAACCC GGCCCGGCTG CTGCTGGTCG ACGAACCGAC GAAGGGGTTG
GCGCCCAAGC TGGTCGAGCA GGTCGGCGAC GCGCTGACCC GGATCGCCGA GCGCACCACC
GTCCTGCTGG TCGAGCAGAA CCTGCCGCTG GTCCGGCGGA TCGCCCGCGA CGCGATCGTG
CTGGACACCG GCCGGGTGGT GCACCGCTCC CCGGCTGCCG ACTTGATGGC CGACGAGACG
CTGCTGGACT CGCTGCTGGG CGTGTCCGCG GCCGTGCCCG ACCCCGGGAA GGCGACGAGA
TGA
 
Protein sequence
MILRLSDVSV RIAGSHILHG IDLEVAEGGV TALLGRNGVG KSTTLKAILG IVPATGTIEF 
DGRDIAGQPT HKIVRAGIGY VPEDRDVFAG LTVAQNLELA EQPGVDPDYD TVHDLFPELL
ERRKQRAGTL SGGQQQMVAL ARVMLNPARL LLVDEPTKGL APKLVEQVGD ALTRIAERTT
VLLVEQNLPL VRRIARDAIV LDTGRVVHRS PAADLMADET LLDSLLGVSA AVPDPGKATR