| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3911 |
|---|
| Symbol | |
|---|
| ID | 8449530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 4317557 |
|---|
| End bp | 4318315 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645042957 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003203193 |
|---|
| Protein GI | 258654037 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.651155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.068215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCGA CCGACGCGCC GGCCGTCCAG GTCGGCGAGC TCGGCTTCGC CGTCGGCGGC
GCCCAGATCC TGACCGAGAT CGACCTGACG ATTGCCCGCG GCGAGCTGCT GGCCATCATC
GGACCCAACG GAGCCGGCAA ATCCACGCTG GTGAACATGA TCTCCGGGGT GGCCCGGCCC
ACCGCCGGGC AGATCCGGCT CGATGGACGG GATGTCACCG GCCTGTCGGT GCGGCACCGG
GCCCGGGCCG GCATGGGCCG GACGTTCCAG ACGTCCTCGC TGTTCAACGG GCTGACCACG
GTGCAGAACG TCTGTTTCGC GGTCCAATCG GCCGCGCCCG GGGCGCTGAA CCCGTTCCGG
CGGGCCAGCT CCCGGTCGGT GATCGACCAG GCCATGCAGC TGCTGGAGCG GGTCGGTATG
GCCGCCCGCA GCGCCTGGCC GACCGCCGCC CTCTCGCACG GCGACAAGCG CAAGCTGGAG
CTGGCCGTGG CCATGGCCCG GCGGCCGAGC GTGCTGCTGC TGGACGAGCC GATGGCCGGC
GTGGCCATGG AGGACGTGCC GTCGTTGGTG CAGTTGATCG CCGATCTCAA CCGGGACGGG
GTCACCGTGT GCATGGTGGA GCACCACATG CACGTGGTGC TGGGCCTGGC CGATCGGATC
GCGGTGCTGC ACCACGGCCG GTTGCTCGCC GTCGGCACGC CCGCCGAGGT GACCGCGAAC
CCCGAGGTAC GCCGGGCCTA CCTGGGAGAT GCCCTGTGA
|
|---|
| Protein sequence | MSPTDAPAVQ VGELGFAVGG AQILTEIDLT IARGELLAII GPNGAGKSTL VNMISGVARP
TAGQIRLDGR DVTGLSVRHR ARAGMGRTFQ TSSLFNGLTT VQNVCFAVQS AAPGALNPFR
RASSRSVIDQ AMQLLERVGM AARSAWPTAA LSHGDKRKLE LAVAMARRPS VLLLDEPMAG
VAMEDVPSLV QLIADLNRDG VTVCMVEHHM HVVLGLADRI AVLHHGRLLA VGTPAEVTAN
PEVRRAYLGD AL
|
|---|
| |