| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3907 |
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| Symbol | |
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| ID | 8449526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4308367 |
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| End bp | 4311786 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 645042953 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_003203189 |
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| Protein GI | 258654033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0574999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0165259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAGCG AGCAGCCGGA CCCGATCCCG TCGTTCGACG CCTGTGGCCC GCTGCCCAGG
GGGACCACCC TGCTGGAGGC CAGCGCCGGG ACCGGCAAGA CCCACGCCAT CGGCGACCTG
GTCACCCGGT ACATCGCCGA AGGGGTGGCC CGGCCGGACC AGCTGCTGGT GATCACCTTC
GGCCGCGCGG CCAGCCAGGA GTTGCGCGAG CGGGTCCGGG ACCACCTGGT GCGGGCCGAG
CGGGCGCTGG CCGATCCGGC CGCCGCTCGC GCCGGCGCGG ACCCGGTGCA CGCGCTGCTG
GCCGGTGGCC CCGGCGCGCA CGACGTCGAC GAGGCGCAGG TCGGCCGGCG GCGGGACCGG
CTCCGCGCCG CGCTGGCCGG CTACGACGCG TCCACCATCC TGACCACCCA TCAGTTCTGC
CAGTTCGTGC TCACTGGCCT GGGCGTGGCC GGCGACGCCG ACCCGGACGT CGAACTGGTC
GATACCCTGG ACGACCTGAT CGTCCAGGTC GTCGACGACC TCTACATCGC CGCGTTCGCC
CGGCGCGACC TGCCGCCGGT GTTCGACCGG GACACCGCGC TGGCCCTGGC CCGGCGGGTC
GTCGACGACC CGCAGGCCCT GTTGGCGCCG CCGGATCCGG ATCCGATCAG CCCGGCGAAC
TGGCGGATCA AGTTCGGGCA GCGGGTCCGC CGGGAGGTCG AGGAACGCAA GCGGCAGCGC
CGCATCCTGG GCTACGACGA CCTGCTGGGT CGGTTGGCCA CCGCGCTGGC GCCCGCGGAC
GCGCCGGCCC GGGAGCGGAT GCGCCGCCGC TGGTCATTCG TGCTGGTCGA CGAGTTCCAG
GACACCGATC CGGTGCAGTG GCAGATCCTG GACCGGGCGT TCTCCGGGCA CGCGACGATG
GTGTTGATCG GCGATCCCAA GCAGTCGATC TACGCCTTCC GCGGCGGTGA CGTGCCCACC
TACCTGGCCG CCGCGCACAC CGCCGGGCCG GCCCGGGCCA CCCTGGACCG CAACTGGCGG
ACCGACCCGC CGTTGGTCAC CGCGCTGCAG GTGCTGCTGC ACGAGCTGAC CCTGGGCAGC
CCGGAGATCG TGGTGCGGCC GGTCGTCTCC GCGTTGCCCG GCCCCCGGCT GCACGGCGCG
CCCAGCGCCG CCCCGCTGCG GCTGCGGGTG CTGCGCCGCG ACCAGGTGAA CTGTGGGGCC
GGCGAGCTGA TCCCGATCGA CCGGGCCCGC GAGCTGATCG CCCGCGACCT GGCCGCCGAC
CTGGCCGAAC TGCTCGGCGC CGGCGCCACC TTTGACCACA AGCCCTTGCA GGCCGGGCAT
GTCGCGGTGA TCGTGGGCAC GCACAAGCAG GCCCGCACCG TGCAGACAGC GCTGATCCGG
GTCGGTATCC CGGCCGTGGT GGCCGGCAGT TCCAGCGTCT TTCAGACCGA GGCCGCCGAT
CAGTGGGTCA CCCTGCTGGA GGCGTTGGAA CAGCCGCACC GGGCCGCCCG GGTCCGGGCC
GCCGCGCTCA CCGCGTTCGT CGGCTGGTCG GCGGCGGACC TGGCCGCTCG CGGGGAGGAA
GCGACCGACG AGCTCAGCGT GCTGATCAGC GGGTGGGCCG GAGTGCTGGC CACCCGCGGG
GTCGCGGCCC TGCTGGAGGT CGTCGGCGTC GAGACCGGAC TGCCGGCCCG GGTGCTGGGG
CGGGTCGGCG GCGAGCGCCT GCTGACCGAC CTGCGGCACG TCGGGCAGCT GCTGCAGACC
GCGGCGGTCC AGGACAGCCT CGGGGTGGCC GCCCTGGCCG AATGGCTGCG CCGTCGCCGC
GCGGACGACC GGTTGGATGT CACCGCCGAC CGGGTGCGCC GCCTGGAGAC CGACGCCGCC
GCCTGCCAGG TGGTCACCCT GCACGCCAGC AAGGGCCTGC AGTACCCGGT GGTCTACCTG
CCGTTCGCGT TCGACCGCTG GTACAACGAC GAGCCGGACG TGCTGCTGCT GCATCAGGAC
GGTCACCGCG TGCTCGACAT CGGCGGCCCG GACACCCCCG GCCGCGGCCG GCGCCGGGAC
CAGGCCCTGG CCGAGGAGGC CGGGGAGGCG CTGCGCCACC TGTACGTCGG GCTGACCCGG
GCCCAGTCCC AGGTCGTCAC CTGGTGGGCG CCGACGAAGA ACACCCGAAC CTCGGGGCTG
CATCGGGTGC TGTTCGGCGA CCGGGATTTC GACGGTGGCG TGCCCGACAG CGTCAAGGTG
CCCAGCGACG AGGCGGCCCG TACCCGCCTG GACGGCTGGC AGCAGCGCGG AGCGTTGGTG
CTCGAGCAGG TCGGAGTCAG CGCCGCCCGA CCACCGGCGG CGGACGCGCC CCGGCCGGAC
GAGCTGGCCG TGGCCGTGCT GCACCGCGAT CTGGAGCTGC AGCGGTGGCG CCGCGTCTCC
TACAGCTCGC TGTCGGCCGC GGGCTCGTCC GGCCTGTTGA TCGGGGCGGA CGCCGGGCCG
GTGGCCGGTG ACCTCGGGGT GGGCAGCGAA CCGGAACACC CCGAACTGGC CGACGAGGAC
GGCGCGCTCG CCGCGCCGGC CGGCGCACCG GACCCCGTAG CGGACCCCAT GGCGGCCCTG
CGCGCCACCC TCTCGCCGAT GGCCGACCTG CCGGTGGGGG CGACCTTCGG CACCCTGGTG
CACGCCGTGT TCGAGACCAC CGACCCCCGC GCCGCCGACC TGCCTGCCCA GGTGCGGGCC
CGCTGCGCCG AGCAGGTCGC CCGGGTCGGC TTCCCTCTCG ACCCGGACAC GCTGGCCGCC
GCCCTGGTGC CGGTGCTGCG CACCTCCCTC GGCCCGCTGG CCGGCGGCCT GACCCTGGCC
GACCTGGGCA CCCGGGACCG GCTGACCGAG CTGGAGTTCG AGCTGCCGCT GGCCGGCGGC
GACCGCGCGG CCGGCCCGGT GCCGGACCTG GTGCTGGGCG ATCTTGCCCC GGTGATCCGT
CGCCATCTGC CGGCCGCCGA CCCGCTGGCC GGGTACGCCG ACCGGTTGGC CGCGCCGTCG
TTCGCCGAGC TGCCGCTGCG CGGGTACCTG ACCGGCAGCC TGGACGCGGT GTTGCGGCTG
CCCGGCCCGC GGTACCTGGT CGCGGACTAC AAGACCAACT GGCTGGGCGA TTTCGACTCC
GGCGCGCCCT TGTCCCTGTG GGACTACCGG CCGGCGGCGA TGGACGCGGC CATGGCCGGG
TCGGACTACC CGTTGCAGGC CATGCTCTAC ACCGTTGCCC TGCATCGGTT CCTGCGCTGG
CGCCAGCCCG GCTATCACCC GGGCCGCCAC ATCGCCGGCG TGCTCTACCT TTTCGTGCGA
GGGATGGCCG GCCCGGACAC GCCGGAGATC GACGGTCGAC CGTGCGGGGT GTTCGGCTGG
GCGCCGCCGG TCGAGCTGAT CACCGCGGTC TCGGACCTGC TGGACGGGAC CGCGTCATGA
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| Protein sequence | MTSEQPDPIP SFDACGPLPR GTTLLEASAG TGKTHAIGDL VTRYIAEGVA RPDQLLVITF
GRAASQELRE RVRDHLVRAE RALADPAAAR AGADPVHALL AGGPGAHDVD EAQVGRRRDR
LRAALAGYDA STILTTHQFC QFVLTGLGVA GDADPDVELV DTLDDLIVQV VDDLYIAAFA
RRDLPPVFDR DTALALARRV VDDPQALLAP PDPDPISPAN WRIKFGQRVR REVEERKRQR
RILGYDDLLG RLATALAPAD APARERMRRR WSFVLVDEFQ DTDPVQWQIL DRAFSGHATM
VLIGDPKQSI YAFRGGDVPT YLAAAHTAGP ARATLDRNWR TDPPLVTALQ VLLHELTLGS
PEIVVRPVVS ALPGPRLHGA PSAAPLRLRV LRRDQVNCGA GELIPIDRAR ELIARDLAAD
LAELLGAGAT FDHKPLQAGH VAVIVGTHKQ ARTVQTALIR VGIPAVVAGS SSVFQTEAAD
QWVTLLEALE QPHRAARVRA AALTAFVGWS AADLAARGEE ATDELSVLIS GWAGVLATRG
VAALLEVVGV ETGLPARVLG RVGGERLLTD LRHVGQLLQT AAVQDSLGVA ALAEWLRRRR
ADDRLDVTAD RVRRLETDAA ACQVVTLHAS KGLQYPVVYL PFAFDRWYND EPDVLLLHQD
GHRVLDIGGP DTPGRGRRRD QALAEEAGEA LRHLYVGLTR AQSQVVTWWA PTKNTRTSGL
HRVLFGDRDF DGGVPDSVKV PSDEAARTRL DGWQQRGALV LEQVGVSAAR PPAADAPRPD
ELAVAVLHRD LELQRWRRVS YSSLSAAGSS GLLIGADAGP VAGDLGVGSE PEHPELADED
GALAAPAGAP DPVADPMAAL RATLSPMADL PVGATFGTLV HAVFETTDPR AADLPAQVRA
RCAEQVARVG FPLDPDTLAA ALVPVLRTSL GPLAGGLTLA DLGTRDRLTE LEFELPLAGG
DRAAGPVPDL VLGDLAPVIR RHLPAADPLA GYADRLAAPS FAELPLRGYL TGSLDAVLRL
PGPRYLVADY KTNWLGDFDS GAPLSLWDYR PAAMDAAMAG SDYPLQAMLY TVALHRFLRW
RQPGYHPGRH IAGVLYLFVR GMAGPDTPEI DGRPCGVFGW APPVELITAV SDLLDGTAS
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