Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3906 |
Symbol | |
ID | 8449525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4306472 |
End bp | 4308370 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 645042952 |
Product | exodeoxyribonuclease V, alpha subunit |
Protein accession | YP_003203188 |
Protein GI | 258654032 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.436608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0788816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGT TCACCGAGTC CTTCGAGCGA CCGCAGGACC CCTACGATCG GCGGCTGGCC CTGGGCGCCA GCGGACTGCT GCGGGCGGCC AACGTGGCCG ACGTCCTCAG CGCCGCCGAC GTGCACGTGG CCACCCGGAT CGCGCAGCTG GCCGGCGAGC CCGACGACCG GGTGCGGCTG GCCGTCGCGA TGGCGGTGCG CGGGATCCGC AGCGGCTCGG TCTGCATCGA CCTGGCGCAG GCCCGGGCCA CGCTGCTGCT GGCCGATCCC GGCGGGGACT GGCCGGTCCT GCCGGACTGG CGGGACGCGG TCCGGGCCAG CCTGCTGGTC GGCGCCGGCC GGCCGCTGCA GTGGGAGTTC GACCTGCTCT ACCTGGACCG GTACCGGACG CAGGAGCAGC AGGTCCGCGA CGACCTGCGC GACCGGCGGG CGCAGCCACC GCCGGTGGTG GACCGGGTCG CGCTGGCGGA CGGGTTGGAC CGGCTGTTCG CCGGCGGTGA TCCGGGGCAG CGGCACGCCG CCGAGCTGGC CGCGACCGGC TGGACCACGG TGATCGGCGG CGGGCCGGGC ACCGGCAAGA CCACCACCGT GGCCCGGGTG CTGGCCCTGC TGATGGGGCA GCCGGGGGCG CGGCCGCGGG TCGCCATGGC CGCACCGACC GGCAAGGCCG CCGCCCGGCT GCAGGCGGCG GTGCAGGCCC AGGCCGTGGC GCTGAGCCCG GCCGACCGGC ACGACCTGCC GACCCTGACC GCCTCCACGC TGCACCGGCT GCTCGGTTGG CTGCCCGGCC GCAGCCAGCG GTTCCGGCAC GACCGGGACA ACCGGCTGCC GTTCGACGTG GTGGTGGTCG ACGAGACCTC GATGGTCTCG CTGACGATGA TGGCCCGGCT GCTCGAGGCC GTGCGGCCGG ACGCCCGGCT CATCCTGGTC GGCGACCCGG ACCAGCTCGC CTCGGTGGAG GCCGGCGCGG TGCTGGCCGA CCTGGTCGCC GGGCTGACCG CGGTCCCGGC CGCACCTCCG GCCACAGGGT CGGCGACGGG GTCGGCCACA GAGTCGGCAG CGGGGTCGGC CGCAGGGCCG GGCGCGGTCC CACCCGGCCC GCCGGCCATC GCGCCGGCCC GGGCCGACGC GGTGGCCCTG CTGGACCGGA CCTGGCGCTT CGGCGGTGAC ATCGCCGAGC TGGCCGCCGC CGTCCGCGCC GGTGACGCCG ACGCCGCGCT GGCCGTGCTG GCCCGCCCGG GCGCCGACGT GGCCCTGATC GCGCCGGAGG ACACCGCCGG GGCGGGCGCG GCGGTGGACG CCGCCGTCCG ACCCGACGTC GTCGGCACCG CCGCGGCCGT GCGGGCGGCC GCGGATGCCG GCGAGGCGCA GGAGGCGCTG CGCCGGCTGG ACGGCCACCG GGTGCTGTGC GCCCACCGCA GCGGGCCGCG CGGGGTGACG CAATGGACCT ATCGCATCGA GAATTGGCTG GCGGCCGAGG ATCTGCTGCC GCCGCATCGG TTGTGGTACC CGGGCCGGCC GGTGCTGGTC ACCGCCAACG ACTACACGCT GCGGCTGTTC AACGGCGATG TCGGGGTGGC CGTGCTGACC GGGGGCCAGC TGCGGGTCTC CTTCAGCCAG CACGGCCGCA TCGTGGACTA CGCGCCGGGC CGGCTGGCCG ACGTGCAGAC CGTGCACGCG ATGACCGTGC ACCGCAGCCA GGGCAGCCAG TTCGACCGGG TGACCGTCGT GCTGCCGGAG GCGGATTCGC CGCTGTGCAC CCGAGAGTTG TTGTACACGG CGCTCACCCG GGCGCAGACC CGGGTGCGGT TGATCGGCAC CGAGGCCGAG GTACGGGCCG CCGTCGCCCG TCCGGCCGCC CGGGCCAGCG GGCTGCGGCT GCGGATGGCC GGCGGCTGA
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Protein sequence | MSTFTESFER PQDPYDRRLA LGASGLLRAA NVADVLSAAD VHVATRIAQL AGEPDDRVRL AVAMAVRGIR SGSVCIDLAQ ARATLLLADP GGDWPVLPDW RDAVRASLLV GAGRPLQWEF DLLYLDRYRT QEQQVRDDLR DRRAQPPPVV DRVALADGLD RLFAGGDPGQ RHAAELAATG WTTVIGGGPG TGKTTTVARV LALLMGQPGA RPRVAMAAPT GKAAARLQAA VQAQAVALSP ADRHDLPTLT ASTLHRLLGW LPGRSQRFRH DRDNRLPFDV VVVDETSMVS LTMMARLLEA VRPDARLILV GDPDQLASVE AGAVLADLVA GLTAVPAAPP ATGSATGSAT ESAAGSAAGP GAVPPGPPAI APARADAVAL LDRTWRFGGD IAELAAAVRA GDADAALAVL ARPGADVALI APEDTAGAGA AVDAAVRPDV VGTAAAVRAA ADAGEAQEAL RRLDGHRVLC AHRSGPRGVT QWTYRIENWL AAEDLLPPHR LWYPGRPVLV TANDYTLRLF NGDVGVAVLT GGQLRVSFSQ HGRIVDYAPG RLADVQTVHA MTVHRSQGSQ FDRVTVVLPE ADSPLCTREL LYTALTRAQT RVRLIGTEAE VRAAVARPAA RASGLRLRMA GG
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