| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3899 |
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| Symbol | |
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| ID | 8449518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4299490 |
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| End bp | 4301028 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 645042945 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003203181 |
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| Protein GI | 258654025 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.306952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0467716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACACGT TCGACCTGAT CGTCGTCGGC GCCGGGGCCG GTGGTGCGGT CGTCGCCGCC
CGGGCCAGCG AGGACCCGGA CCGCCGGGTG CTGCTGTTGG AGGCCGGGGA CTGCCCGGGC
TCCCCGGCCG AGTTCCCGCC CGAACTGCTG GACGCCGCCG TGGTGCCGGG GGCCCAGCCG
GCGGCCGGAC GGCACTGGCG GTACCCGGTG CGGCTGGCCG GCGACGGGGT CGGCGACATC
TTCCGGGGCC GGTTCCTGGG CGGCAGTACC GCGACCAACG GCGGTTACTT CATGCGGGCG
CGGCAGGAGG ACTTCGCGGC CTGGGCGGCG GCCGGCAACC CCGCCTGGGC CTACGAGCGG
GTACTACCGT TCCTGCGGGG ACTGGAACGG GACCTGGACT ACGGCGCGAC CGACCTGCAC
GGCGGGTCCG GGCCGGTGCC GGTGCAGCGT CCGGCCCTGA CCGGGCCTCT CGCGGCCGCC
TTCGCCCAGG CCGCCGCCGA GCTCGGCTTC CCGGCCGAAC CGGACAAGAA CGCCCAGAAC
GCACCGGGTT TCGGCCCCGT CCCGCGGAAC GTGGAGCACG GCCGGCGGTG GAACACCGGC
CTGGCCTACG TGCTGCCGGC GATCGGCCGG CCGAATCTGA CGGTGCGCGG CGGGGCCACG
GTGGGCCGGC TCCGGGTGCG CGGCGGCCGG GCGGTCGGCG TGGAGCTGCA CGCCGGCGGG
GCCACCGAGG TGATCGACGC GGGCGGCGTC GTGGTCTGCG CCGGCGCCCT GAACACCCCG
GCGCTGCTGC TGCGGTCCGG GATCGGTCCG GCCGCCCCGC TGCGCGCGCT GGGCATCGAG
GTGCTGGTGG ACCTGCCGGC CGTCGGCCGG CGGTTCAGCG ACCACCCGCA GGTCGTCCTG
AACTGGGTGC CCCGCGACTA CCGGGGTCGC GGCGCGGACA GCTGGATCAG CGGCGTCCTG
AACGCCCGGT CGGCCGGCGG TCCGGCCGCG GGCGACCTGC AGGTGCTGCC CGCACACGTG
CCGATGAGCG TGCTGACCGG GGGCGTCGCC GGGCCGGCCC CGGCGCTGCC GGTGCTGATC
TCGGCGATGG GCGCGCAGCC GACCGGGCGG CTGCAGCTGG TGGATGCCGA CCCCGACGTC
CCGCCGGACC TGCGCTACGG CTACCTGTCC ACGGCCACCG GCCGGGCCCG GCTGCGCGAA
GGCGTCCGGC TGGCCCTGGA GCTGGTCAGC ACCAAGGCCT TCGCCGATCT GACCGCCGGC
GCACCCGATC TGGACCGGCG GACGGCCGCC GACGACGACG CCCTGGACGG CTGGATCCGC
GGCCGGCTGG GCACCTCGCT GCACACCTGC GGCACCGCCC CGATGGGCTC GCCCGACGAC
CCGGACACGG CGGTGGACCA GACCGGCCGG GTGCACGGCA TCGCCGGGTT GCGCCTCGCC
GACACCTCGA TCCTGCCGGC CGCCCCGCTG CGCGGACCGG CCAACACCGC GGTGCTGATC
GGTGAGATCG TCGCGCACGC CCTGCGCTCG GGCGGCTGA
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| Protein sequence | MHTFDLIVVG AGAGGAVVAA RASEDPDRRV LLLEAGDCPG SPAEFPPELL DAAVVPGAQP
AAGRHWRYPV RLAGDGVGDI FRGRFLGGST ATNGGYFMRA RQEDFAAWAA AGNPAWAYER
VLPFLRGLER DLDYGATDLH GGSGPVPVQR PALTGPLAAA FAQAAAELGF PAEPDKNAQN
APGFGPVPRN VEHGRRWNTG LAYVLPAIGR PNLTVRGGAT VGRLRVRGGR AVGVELHAGG
ATEVIDAGGV VVCAGALNTP ALLLRSGIGP AAPLRALGIE VLVDLPAVGR RFSDHPQVVL
NWVPRDYRGR GADSWISGVL NARSAGGPAA GDLQVLPAHV PMSVLTGGVA GPAPALPVLI
SAMGAQPTGR LQLVDADPDV PPDLRYGYLS TATGRARLRE GVRLALELVS TKAFADLTAG
APDLDRRTAA DDDALDGWIR GRLGTSLHTC GTAPMGSPDD PDTAVDQTGR VHGIAGLRLA
DTSILPAAPL RGPANTAVLI GEIVAHALRS GG
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