Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3825 |
Symbol | |
ID | 8449444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4199507 |
End bp | 4200067 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645042875 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003203111 |
Protein GI | 258653955 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.148692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0649656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGAC GGGGGACCCC GGCGAGCGGG GCGGCGGTCG GGGTGCTGTT CGAGCGACAC CGAGATCGCC TGCGCCGGTA CCTGACCGGC CGGGTCGGGC CCACCCATGC GGACGACCTG CTGTCCGAGG TGTTCCTGGC CGCGTGTCGC CGGTGGTCGT CGTTCGACCC GGATCGGGGC TCCGAGCTCG CCTGGTTGTT CGGCATCGCC ACCACTGCGA TCCGCAGCCA CGCTCGGGAC GAGGCCCGCC ACCTGCGCCG AATCCTGGCG CTGAGCGCCG ATCGACCTCA GGCAGGCGGG GCCGACGAGA GCGGTGACCG CGTGGACGCC CAGCGCCGGA TCCGCCGACT CCTGCCCGAT CTGAAGCTGC TCGACCCGAT CGACCGCGAC ATCCTGCTGC TTATTGCCTG GGCCGGCCTC AGTCCAGCAG AAGTCGCCCT CTCCCTTGAC CTTCCAGCGG CGACTATCCG GTCGCGGCTG CACCGGGCCC GGCGACGACT TCGCCGCGTC GATGCCACCC ATGACCTCGA GCCCGAACCT TCGGAAGGCG GCACCCGATG A
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Protein sequence | MTRRGTPASG AAVGVLFERH RDRLRRYLTG RVGPTHADDL LSEVFLAACR RWSSFDPDRG SELAWLFGIA TTAIRSHARD EARHLRRILA LSADRPQAGG ADESGDRVDA QRRIRRLLPD LKLLDPIDRD ILLLIAWAGL SPAEVALSLD LPAATIRSRL HRARRRLRRV DATHDLEPEP SEGGTR
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