Gene Namu_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3823 
Symbol 
ID8449442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4197907 
End bp4198671 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID645042873 
Productpentapeptide repeat protein 
Protein accessionYP_003203109 
Protein GI258653953 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.199719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0347073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTTG AGCGCCGGTC CGGTGACCTG TCCGGGGCGC AGTTCGTCGA CGCCGACCTG 
CGGGGTGCGC GGTTCGCCCG CTCGGATCTG TCGGGTGTGG TGATGCGGGG CGTCCAGCTG
GACGGCGCGG ACATCGATGC GCCCTGGTTG TCCGAGGCCG ACAGTTCCCT GCGCGTCAAC
GGTGTCGAGG TAGCCGCGCT GGTCGAGGCC GAACTCGACC GCCGCTTTCC CGGGCGCGGC
CAGCGGCGGG CCACCGATCC GGACGGGCTA CGCGCGGCCT GGACCGCGGT GGAGCGGACC
TGGGCGGGCA CCCTGGGTCG GGTCGCAGGG ATGCCGCGGG GGACGGTGGA GAAGTCCGTG
GACGGCGAAT GGTCCTTCGC CCAGACCCTG CGGCACCTGA TCATGGCCAC CGACACCTGG
TTGGGTCGGG CCATTCTCGG GATCGAGCAG CCCTATCACC CCATCGGTCA GCCGAACGCC
GAGTACGAGT CCGACGGGTA CGACATGACG GTCTTTGCCA CGACCCCACC GTCGTATGCG
CAGGTGCTGG CCGTGCGGGC CGACCGGCTG ACCATGGTGC GGGACTTCCT GGCCACGATC
GGCCCATCCG AACTGGACGC CGAACGGCGA AACCCCTGGG CGCCTGAGTA TCCCGAAACC
GTCCGCTCGT GCCTGCACGT GATCCTCGGC GAGGAGTGGG AGCACCACCG GTATGCCGTC
CGCGATCTCG ACGCGCTCGA GGCCCGGCCG GGCCCACCCA CGTGA
 
Protein sequence
MGVERRSGDL SGAQFVDADL RGARFARSDL SGVVMRGVQL DGADIDAPWL SEADSSLRVN 
GVEVAALVEA ELDRRFPGRG QRRATDPDGL RAAWTAVERT WAGTLGRVAG MPRGTVEKSV
DGEWSFAQTL RHLIMATDTW LGRAILGIEQ PYHPIGQPNA EYESDGYDMT VFATTPPSYA
QVLAVRADRL TMVRDFLATI GPSELDAERR NPWAPEYPET VRSCLHVILG EEWEHHRYAV
RDLDALEARP GPPT