Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3823 |
Symbol | |
ID | 8449442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4197907 |
End bp | 4198671 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645042873 |
Product | pentapeptide repeat protein |
Protein accession | YP_003203109 |
Protein GI | 258653953 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.199719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0347073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTGTTG AGCGCCGGTC CGGTGACCTG TCCGGGGCGC AGTTCGTCGA CGCCGACCTG CGGGGTGCGC GGTTCGCCCG CTCGGATCTG TCGGGTGTGG TGATGCGGGG CGTCCAGCTG GACGGCGCGG ACATCGATGC GCCCTGGTTG TCCGAGGCCG ACAGTTCCCT GCGCGTCAAC GGTGTCGAGG TAGCCGCGCT GGTCGAGGCC GAACTCGACC GCCGCTTTCC CGGGCGCGGC CAGCGGCGGG CCACCGATCC GGACGGGCTA CGCGCGGCCT GGACCGCGGT GGAGCGGACC TGGGCGGGCA CCCTGGGTCG GGTCGCAGGG ATGCCGCGGG GGACGGTGGA GAAGTCCGTG GACGGCGAAT GGTCCTTCGC CCAGACCCTG CGGCACCTGA TCATGGCCAC CGACACCTGG TTGGGTCGGG CCATTCTCGG GATCGAGCAG CCCTATCACC CCATCGGTCA GCCGAACGCC GAGTACGAGT CCGACGGGTA CGACATGACG GTCTTTGCCA CGACCCCACC GTCGTATGCG CAGGTGCTGG CCGTGCGGGC CGACCGGCTG ACCATGGTGC GGGACTTCCT GGCCACGATC GGCCCATCCG AACTGGACGC CGAACGGCGA AACCCCTGGG CGCCTGAGTA TCCCGAAACC GTCCGCTCGT GCCTGCACGT GATCCTCGGC GAGGAGTGGG AGCACCACCG GTATGCCGTC CGCGATCTCG ACGCGCTCGA GGCCCGGCCG GGCCCACCCA CGTGA
|
Protein sequence | MGVERRSGDL SGAQFVDADL RGARFARSDL SGVVMRGVQL DGADIDAPWL SEADSSLRVN GVEVAALVEA ELDRRFPGRG QRRATDPDGL RAAWTAVERT WAGTLGRVAG MPRGTVEKSV DGEWSFAQTL RHLIMATDTW LGRAILGIEQ PYHPIGQPNA EYESDGYDMT VFATTPPSYA QVLAVRADRL TMVRDFLATI GPSELDAERR NPWAPEYPET VRSCLHVILG EEWEHHRYAV RDLDALEARP GPPT
|
| |