Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3774 |
Symbol | |
ID | 8449393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4140858 |
End bp | 4142609 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645042825 |
Product | type III restriction protein res subunit |
Protein accession | YP_003203061 |
Protein GI | 258653905 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.476443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.253817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGGG TGGGGCAGCC GCCGCTGCGG CCTTGGCAGC GCGAGGCACT GGGGGCCTAC CATGCGGCGC ACGCCGGCGG GGGACGGCGC GACTTCCTGG TCACTGCCAC CCCGGGCGCC GGCAAGACGA CGTTCGCCCT CGCGGTGGCC GGCGACCTGC TGCGCCGCCG GGTGATCGAC CGCGTCGTCA TCGTCTGCCC GACCGACCAT CTGCGCACCC AGTGGGCCGA CGCGGCCGCC GCCTTCAACC TGGTGCTGGA CCCGAAGATG TCCAACGCGC AGGGCCCGGT GCCGGCCGGC TGCCAGGGCT ATGTCGCCAC GTACGCGCAG GTCGCGGCGC GCCCGGCCAT CCACCAGGCC CGCAGCGGCA AGCTGCGCTC GTTGGTGGTG CTCGACGAGA TCCACCACGC CGGGGACGGG TTGTCCTGGG GTGAGGCGGT CGGCGAGGCG TTCGGCGAGG TGCACCGGCG GCTGTCGCTG ACCGGGACGC CGTTCCGGAC CCGGGCCGGC GAGCGGATCC CGTTCGTCGA GTACGAGATC GACGGCGACC TGCTGCGTTC GGTCGCCGAC TTCACCTATG GCTACCGCCG GGCGCTGGCC GACCGGGTGG TCCGGCCGGT CGTGTTCGCC GCCTACAGCG GCGTCTCCCG GTGGCGCAAC AGCGCCGGCG AGGTGATCGC CGCCTCGCTC ACCGAGGCCG GCACCAAGTC GGTGGAGACG GCGGCCTGGC GGACGGCGCT GGATCCGGCC GGTGGTTGGG TGCCGCACGT CATCGCGGCG ATGGACGAGC GGATCAGCCA GTTGCGGTCC TCGGGCATTC CCGACGCCGC CGGGCTGGTC CTGGCCAGTG ATCAGGACGA CGCCCGGGAC TACGCCGACG TGGTGCATCG CATCACCGGC ACACGCCCGG TGCTGATCCT GTCCGACGAC GCCGCGGCAT CCAAGCGGAT CGAGCGGTTC CGCGGCAGCG ACGAGCGGAT CGCGGTGTGT GTGCGGATGA TCTCCGAAGG CGTCGACATC CCCCGCGCCG CCTGTCTGGC CTGGATGACC TCCTACCGGA CGCCGCTGTT CTTCGCCCAG GCCGTCGGCC GCGTGGTCCG GGCCCGGGGG GCGCACGAGG CGGCGACGGT GTTCCTGCCG GCCGTGCGGC CGCTGCTGGC CCTGGCCGCC GAGTTGGAGC AGGACCGCAA CTACGTCATG GCGCCGCCCC CGCCGGTGCA GGACGACCTG GACGCGCTGG CCGATCCGCT GCCCCGGGAG CCGGTCGAGC CGGGCAGCCG GAAGATCGAG GGCCTGGACT CGGAGGCCGA GTTCGCGCAC GTGCTGCACT CGGGCCGGGC CGTGGTGTCC GGCGGGTCGG CGCCGGGCCG GGAGCCGGCC GTCATGACGT CCGGGATGAT CGGCGAGGAG GACCAGGATT ATCTGGGGCT GCCCGGATTG CTCAGCCCGG AACAGACCGC GGCCCTGCTG GCCACCCGGG ATTCCGACCT GCGGCGCCGG GTGCGATCCA TGCCGCGGGA CCCGTTGGCC GACGCGCCGG ACCCGGACGC CGGGTCGATG GCCGGCTGGC GGGCCGCCGC GGATCTGCGG CGTGAGGTCA ATCAGCTGGT TGCCCGGGTC GCGGCGCGGA CCGGCAAGCC GCACGCCAGC GTGCACTCCC AGGTGCGTCG GGCGGTGCCC GGACCGGCCT CGGCGGCCGC CGACCCGGAC GTGCTGACCG CCCGCCGGGA CCACCTGCTG GGCCTGCTGT AA
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Protein sequence | MSGVGQPPLR PWQREALGAY HAAHAGGGRR DFLVTATPGA GKTTFALAVA GDLLRRRVID RVVIVCPTDH LRTQWADAAA AFNLVLDPKM SNAQGPVPAG CQGYVATYAQ VAARPAIHQA RSGKLRSLVV LDEIHHAGDG LSWGEAVGEA FGEVHRRLSL TGTPFRTRAG ERIPFVEYEI DGDLLRSVAD FTYGYRRALA DRVVRPVVFA AYSGVSRWRN SAGEVIAASL TEAGTKSVET AAWRTALDPA GGWVPHVIAA MDERISQLRS SGIPDAAGLV LASDQDDARD YADVVHRITG TRPVLILSDD AAASKRIERF RGSDERIAVC VRMISEGVDI PRAACLAWMT SYRTPLFFAQ AVGRVVRARG AHEAATVFLP AVRPLLALAA ELEQDRNYVM APPPPVQDDL DALADPLPRE PVEPGSRKIE GLDSEAEFAH VLHSGRAVVS GGSAPGREPA VMTSGMIGEE DQDYLGLPGL LSPEQTAALL ATRDSDLRRR VRSMPRDPLA DAPDPDAGSM AGWRAAADLR REVNQLVARV AARTGKPHAS VHSQVRRAVP GPASAAADPD VLTARRDHLL GLL
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