| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3744 |
|---|
| Symbol | |
|---|
| ID | 8449363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4110159 |
|---|
| End bp | 4111646 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645042796 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003203032 |
|---|
| Protein GI | 258653876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0190412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.14129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGG ACACGGTCAA GCAGCGGGAA CGGGCGCAGC AGATCGCGTT GTTCCGATAT
CAGTTGATCT GCCCGGCGCT GGAACCGGGC CTGTCGACCA AGCAACGCGG ACGGGTCGTT
CGGGCGATCG CCGACCGGGA ACACGACGGC CCGTTCGGCG GCCGGGTCCG ATACTCGCGG
GAGTCGTTGG ACCGGTGGAT CCGCCGGTAC CGGGCCGGCG GGTTCGAAGG TCTGTGCCCG
TCGCCCCGGG AACCCGGCAC CCGGATCGAC ACCGGCGTGT TCGAGCTGGC CGCCGGTCTG
AAACGGGAGA ACCCGGCCCG CACGGTCGCC CAGGTCGCCC GGATCCTGCG ATCCTCGACC
GGCTGGTCAC CGTCGGAAAC GACGCTGCTG CGGCATTTCC ACCGGCTGGA CCTGATGGTG
CCCGGCGGCG CCGGGCCGGC CGTGTTCGGC CGGTTCGAAG CGGCCGATTG CAACGAACGG
TGGGTCGGCG ACGCCCTGCA CGGGCCCAGG GTCGCCGGCC GGAAAACGTA CTTGTTCGCG
TTCCTGGACG ACCACAGCCG GGTGGCCGTG GGGTATCGGT TCGGGTTCGC CGAGGACACC
GTCCGGCTGG CCGCGGCCCT GCAACCCGCG TTGGGCAGCC GCGGCGTCCC CGGCTCGGTC
TACGTCGACA ACGGGTCCGC GTTCGTCGAC AACTGGCTGC TGCGGGCCTG CGCGGTGCTC
GGGATCCGGC TCGTCCACAG CCGTCCGGGG CAGCCGCAGG GGCGGGGCAA GATCGAACGC
TGGTTCCGCA GCGTGCGCGA CCAGTTCCTG GTCGAGATCG ATGACAGCAC CGCCGACCAG
ATCCGGGATA CCGGGATGAC CCCCGCCGGC GCCCTGCTGG AACTCAACGG GTTGTTCACC
GCCTGGGTCG AGGCGTCCTA TCACCACGTG CATTCCGAGA CCGGGCAGAG CCCCTTGCAA
CGCTGGACCG ACGGGTGGCA GCGGGCCGGC CGGTCTCCGG CGATGCCGAC CCCCGCGGAT
CTGACCGAGG CGTTCCTGTG GTCCGAACAA CGCGTGGTCA CCAGGACCGC GACGGTGTCG
CTGCACGGCA ACACCTACCA GGTTCAGGCG GGGCTGGTCG GTCGGAAAGT CGAGTTGGTG
TTCTCCCCGT TCGATCTGGA AACCCTGCGG GTCCGCTACG ACGGCCGGGA CCACGGGCCG
GCGGTGCCGC ATCGGATCAC CCGGCACACC CATCCCAAGG CCAGACCCGA GACCCCTGAA
CCGGCAACGA CACCGCGGAC GGGGATCGAC TACCTGGCGC TGGTCGCGCA GGACCACCAG
CAACAGATCA GTGCCGACCA GAAGATCAAC TATCACACCC TCTACCCAGG TGAGCTGCCC
GGGCAGCTCA GCATCGACGA CGCCCTGGCC GACCTCAACG GCAACGACGG CAACGACGGC
AACGACGGCA ACGACGGCAA CGACGATGGT CAGGCGGTGG CCCGGTGA
|
|---|
| Protein sequence | MSVDTVKQRE RAQQIALFRY QLICPALEPG LSTKQRGRVV RAIADREHDG PFGGRVRYSR
ESLDRWIRRY RAGGFEGLCP SPREPGTRID TGVFELAAGL KRENPARTVA QVARILRSST
GWSPSETTLL RHFHRLDLMV PGGAGPAVFG RFEAADCNER WVGDALHGPR VAGRKTYLFA
FLDDHSRVAV GYRFGFAEDT VRLAAALQPA LGSRGVPGSV YVDNGSAFVD NWLLRACAVL
GIRLVHSRPG QPQGRGKIER WFRSVRDQFL VEIDDSTADQ IRDTGMTPAG ALLELNGLFT
AWVEASYHHV HSETGQSPLQ RWTDGWQRAG RSPAMPTPAD LTEAFLWSEQ RVVTRTATVS
LHGNTYQVQA GLVGRKVELV FSPFDLETLR VRYDGRDHGP AVPHRITRHT HPKARPETPE
PATTPRTGID YLALVAQDHQ QQISADQKIN YHTLYPGELP GQLSIDDALA DLNGNDGNDG
NDGNDGNDDG QAVAR
|
|---|
| |