Gene Namu_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3511 
Symbol 
ID8449130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3853891 
End bp3854916 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content72% 
IMG OID645042589 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003202825 
Protein GI258653669 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0677107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.351268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCA CCCTGAGCGA GATCGCCGCG CACGCCGGGG TCAGCCCGGC CACCGCGTCC 
CGGGTGCTCA ACGAACGTCC GGGCGTGAAC GCGCAGACCC GGCGCCGGGT GCTGGATGCG
GCCGAGCTCC TCGGCTATGC CCGGCCGACC ACCCTGCAGG CCCGCCGGGT CGGCCTGATC
GGCGTGGTGA TCGCCGAACT GGGCAATCCG ATCTTCCCGG TCTTCGCGCA GGCCATCGAG
CGGGCCCTGC CGCCCTTCGG CTACAACGCG CTGCTCTCGA CCCGGCACCT GGGGGCGCCC
GGCGAGACGG CGTCGATCCA GTTGCTGCAG GACAACGGTG TCGCCGGCAT CATGTTCCTC
TCCGGCATCC ATTCCGATGC GCTGGCCGAC ACTTCGCACT ACGCCGAACT GCGCGAGCAG
GGCGTGCCGT TGGCCTTCAT CAACGGCCTG ATCCCCGATT TCGACGCGAC CTTCGTGGCC
GACGACGACG CCGCCGGCAT GGATCTGGCC GTGCGCCACC TGCTGGCGTT GGGCCACCGG
CACATCGGCA TCACGACCGG CTCCACCCGG TACACGCCGT CGGCCCGCAA ACTCGCCGGC
TTCCAGCGCG CGATGCGGCG GCACAACCCG CAGGCCAAGG CCGAGGTCCA CATCGGCGAC
TACTCGGTCG AGGCCGGCCG GGTCGCCGCG ACGGACCTGA TCGGTCGCGG GTGCACCGGC
ATCCTCGCCG CGTCCGACTT CACCGCGCTG GGCGTGATCC GCGGCGCCCG ACGGCTCGGA
CTCCGCGTGC CGCAGGACAT CTCGGTGATC GGCTACGACG GCTCCCCCGT CATGGCGTTC
ACCGGTCCGC CGCTGACCAC CATCAAGCAG CCGGTGGATG CTCTGGCCGG CGCGGCCGTG
CAGTCGCTGG TCCGGGACAT CGAGGGCCGG CCCGGCCCGC GCACCGAGGT GCTCTTCCAG
CCGGAGCTGG TGGTGCGCAG CTCCACCGAC GCCGCGCCGA CCCGGCCGGG ACGCGCGACC
CACTGA
 
Protein sequence
MSVTLSEIAA HAGVSPATAS RVLNERPGVN AQTRRRVLDA AELLGYARPT TLQARRVGLI 
GVVIAELGNP IFPVFAQAIE RALPPFGYNA LLSTRHLGAP GETASIQLLQ DNGVAGIMFL
SGIHSDALAD TSHYAELREQ GVPLAFINGL IPDFDATFVA DDDAAGMDLA VRHLLALGHR
HIGITTGSTR YTPSARKLAG FQRAMRRHNP QAKAEVHIGD YSVEAGRVAA TDLIGRGCTG
ILAASDFTAL GVIRGARRLG LRVPQDISVI GYDGSPVMAF TGPPLTTIKQ PVDALAGAAV
QSLVRDIEGR PGPRTEVLFQ PELVVRSSTD AAPTRPGRAT H