Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3511 |
Symbol | |
ID | 8449130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3853891 |
End bp | 3854916 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645042589 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003202825 |
Protein GI | 258653669 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0677107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.351268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGTCA CCCTGAGCGA GATCGCCGCG CACGCCGGGG TCAGCCCGGC CACCGCGTCC CGGGTGCTCA ACGAACGTCC GGGCGTGAAC GCGCAGACCC GGCGCCGGGT GCTGGATGCG GCCGAGCTCC TCGGCTATGC CCGGCCGACC ACCCTGCAGG CCCGCCGGGT CGGCCTGATC GGCGTGGTGA TCGCCGAACT GGGCAATCCG ATCTTCCCGG TCTTCGCGCA GGCCATCGAG CGGGCCCTGC CGCCCTTCGG CTACAACGCG CTGCTCTCGA CCCGGCACCT GGGGGCGCCC GGCGAGACGG CGTCGATCCA GTTGCTGCAG GACAACGGTG TCGCCGGCAT CATGTTCCTC TCCGGCATCC ATTCCGATGC GCTGGCCGAC ACTTCGCACT ACGCCGAACT GCGCGAGCAG GGCGTGCCGT TGGCCTTCAT CAACGGCCTG ATCCCCGATT TCGACGCGAC CTTCGTGGCC GACGACGACG CCGCCGGCAT GGATCTGGCC GTGCGCCACC TGCTGGCGTT GGGCCACCGG CACATCGGCA TCACGACCGG CTCCACCCGG TACACGCCGT CGGCCCGCAA ACTCGCCGGC TTCCAGCGCG CGATGCGGCG GCACAACCCG CAGGCCAAGG CCGAGGTCCA CATCGGCGAC TACTCGGTCG AGGCCGGCCG GGTCGCCGCG ACGGACCTGA TCGGTCGCGG GTGCACCGGC ATCCTCGCCG CGTCCGACTT CACCGCGCTG GGCGTGATCC GCGGCGCCCG ACGGCTCGGA CTCCGCGTGC CGCAGGACAT CTCGGTGATC GGCTACGACG GCTCCCCCGT CATGGCGTTC ACCGGTCCGC CGCTGACCAC CATCAAGCAG CCGGTGGATG CTCTGGCCGG CGCGGCCGTG CAGTCGCTGG TCCGGGACAT CGAGGGCCGG CCCGGCCCGC GCACCGAGGT GCTCTTCCAG CCGGAGCTGG TGGTGCGCAG CTCCACCGAC GCCGCGCCGA CCCGGCCGGG ACGCGCGACC CACTGA
|
Protein sequence | MSVTLSEIAA HAGVSPATAS RVLNERPGVN AQTRRRVLDA AELLGYARPT TLQARRVGLI GVVIAELGNP IFPVFAQAIE RALPPFGYNA LLSTRHLGAP GETASIQLLQ DNGVAGIMFL SGIHSDALAD TSHYAELREQ GVPLAFINGL IPDFDATFVA DDDAAGMDLA VRHLLALGHR HIGITTGSTR YTPSARKLAG FQRAMRRHNP QAKAEVHIGD YSVEAGRVAA TDLIGRGCTG ILAASDFTAL GVIRGARRLG LRVPQDISVI GYDGSPVMAF TGPPLTTIKQ PVDALAGAAV QSLVRDIEGR PGPRTEVLFQ PELVVRSSTD AAPTRPGRAT H
|
| |