| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3403 |
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| Symbol | |
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| ID | 8449018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3740711 |
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| End bp | 3742252 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 645042480 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003202720 |
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| Protein GI | 258653564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000797372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000013818 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCTGA ACCCGCGGGC CGATCCGGCC GGGCCGCGGG CCGGAGCCGG CGGCGCCGGG
ATCGCGCTGC TGGGGGTGAT GGCGGCGGTC CAGGGCTCGG ATCCCAACAT CGCCAGCACC
GCCCTGGTCG GCGCCAGCCG CGGCCTGCAG ATGACCGGTG GCCTGCTGGC CCTGGCCGCC
AGCGTGTCCA CCCTGGCGCT GGCCGCCACG GTCATCTCCA CCGGGTTGCT GGCCGACCGG
TTCGGCCGGC GCGGCGTGCT GATGGCCGCG TTGGCGCTCT CGGCCGCGGG CGACCTGATC
GCCGCCCTGG CCCCGACCGC AGGGCTGTTC CTGATCGGCC GGGCGGTGGC CGGGATCGGC
CTGGGCGCGG TGTACGGGGC GGCCTTCGCC TACATCCGGG CGATCACCCC GCCCGATCGG
ATCGCCGGTG CCATCGGCAT TTTCGGCGCC GTCTCGGGCG GCGTCACGGT GCTGATGACG
TTCCTGGGCG GGGCCCTGGC CTCGGTGCAC TGGCGGCTGG CCTTCCTGGT GGTGCCGGTG
GCCGCCCTGC TGTGCGTGCC GGCGGTGCGG GCGGTGCTGC CGGCCCAGCC GCGGGTCGCC
GACGGCCCGC GGGACTATCC GGGCCAGGTG CTACTGGCCC TGGGCGTGGT CGGCGTGCTC
TACGGGTTCA GCCACGCCGC CGACGGGTTG ACCTCGCCGC TGACCTTCGG CCCGCTGCTG
GGCGGGCTGG TGCTGCTGGC CTTGTTCGTG GTCCGCGAGC GGCACACGTC GGCCCGCTTC
TTCCCGGTGG AGCTGCTGAC CAAGCCGCTG TTCCTGGCCG CCATCTGCGC CGGCTTCGTC
TACAACTTCG GCACCGCCGT CGGCTTCCTG CAGCTCACCG ACCTGTGGCA GTACGTGGTC
GGCCTGTCCA CGCTGCGGGT CTCGCTGTGG CAGATGCCGT TCCTGCTGGC CGGCATCGCC
GCCGCGGTGC TGTTCGGCCG GCTGATGACC AGGGGGCTGA CCGCGGCCAG CACGGTGGCC
ATCGGGTCGC TGGCCGCGGC GGCCGGGTTC GTCCTGCTCG CCGTGCTGCA TTCGTCGACC
TCGCTGTGGG GCTTTCTGCC CGGCTCGATC CTGCTCGGCG CGGGCGTCAT CATCGCCTCG
CTGCCGTACG GGACGCTGAT CATCGCGCAG GCCCCGGCCC GCTACTTCGG GCCGGTCACC
TCGTCGCGGA CGACCATCGG CCAGTTCTTC TACGCGGCCG GGCTGGCCCT GTCCACGGTG
CTGGTGAACA CGATGACCAC CGGCGGGGTG GTCCGCCGAC TGGAGCAGGC CGGCGTGCCG
CCGACCGACA CCGGGCAGGG GCTGGACGCG GTCACCGCCT TCGCCGCCGA CGGCACCCGC
CCCAGCACCG CCCTGGGCCA GCAGGCGCTG GCCGAGGCGG CCCAGTCCTA CGGCCAGGCG
TTCGCGCTGA CGACCCTGCT GGCTGCCCTG GTCACCCTGA TCGTCGGCGG CCTGGGCTGG
TGGCTGCTGC GCCGGCACGA GGCGCGACCG GCCACCGGCT GA
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| Protein sequence | MLLNPRADPA GPRAGAGGAG IALLGVMAAV QGSDPNIAST ALVGASRGLQ MTGGLLALAA
SVSTLALAAT VISTGLLADR FGRRGVLMAA LALSAAGDLI AALAPTAGLF LIGRAVAGIG
LGAVYGAAFA YIRAITPPDR IAGAIGIFGA VSGGVTVLMT FLGGALASVH WRLAFLVVPV
AALLCVPAVR AVLPAQPRVA DGPRDYPGQV LLALGVVGVL YGFSHAADGL TSPLTFGPLL
GGLVLLALFV VRERHTSARF FPVELLTKPL FLAAICAGFV YNFGTAVGFL QLTDLWQYVV
GLSTLRVSLW QMPFLLAGIA AAVLFGRLMT RGLTAASTVA IGSLAAAAGF VLLAVLHSST
SLWGFLPGSI LLGAGVIIAS LPYGTLIIAQ APARYFGPVT SSRTTIGQFF YAAGLALSTV
LVNTMTTGGV VRRLEQAGVP PTDTGQGLDA VTAFAADGTR PSTALGQQAL AEAAQSYGQA
FALTTLLAAL VTLIVGGLGW WLLRRHEARP ATG
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