Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3347 |
Symbol | |
ID | 8448962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3683821 |
End bp | 3684816 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645042424 |
Product | Transketolase central region |
Protein accession | YP_003202664 |
Protein GI | 258653508 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3958] Transketolase, C-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.027962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.023237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACA CCGTCACACC ATCCCGGGCC AAGACCTCCG CGATGATCGC CAGCATCGCC GAGCCCGGCC AGAAGACCGC ATCGGCGCCG TTCGGGCATG CCCTGGTCGC GCTGGCCGAA CAGGACCCGA CCGTCGTCGG GCTGTCGGCC GATCTGGCCA AGTACACCGA CATGCACATT TTCCGGGACC GCTTTCCGGA GCGGTTCTTC CAGGTCGGCA TGGCCGAGCA GGTGCTGCTC GGCGCGGCCG CCGGGATGGC CGAGACCGGC CTGGTCCCGT TCGTCTCCAC CTACTCGGTG TTCGCCGCCC GCCGCGCCTA CGACTTCCTG TGCCTGGACA TCGCCGAACC CAACCTGAAC GTGAACGTGG TCGGCGGGCT GCCCGGCCTG ACCACCGGTT ACGGGCCCAG CCATCAGGCG ACCGAGGACA TGGCGATCTT CCGGGGCATG CCCAACCTGA CCATCGTCGA CCCGTGCGAC TCGGTCGACA TCGAACAGGC CGTCCCGCAG CTGGCCGCCG CGGCCGGCCC GACCTACCTG CGGCTGCTGC GCGGCCACGT GCCCACCGTG CTGGACGAGT ACGACTACAC CTTCGAACTC GGCAAGGCCT CGGTGCTGCG CGGCGGCCAC GACGTGGTGC TGATTTCCAG CGGGCTGATG ACCATGCGAG CGCTGCAGGC GGCCACCGCC CTGGCGGCGC ACAAGGTCGA CGTCGCGGTC GTGCACACCC CGACGATCAA GCCGTTCGAC GCCGAAACGG TGCTGGCCGA GCTGAATACC GACCGGCTCG CGGTGACCCT GGAGAACCAC ACCATCCGCG GCGGCCTGTT CGAAACCGTT GCCTCCGCCG CGGTTCTCGC CGGCGTGGCC AAGCGGGTGA TCCCGGTGGC GCTGCCCGAC GCGTTCCTGG ACGCCGGCGC CCTGCCCACC CTGCACCGCC GGTACGGGCT GGATGTCGAC AGCATCGTGG CCACGGTCCT GGACGGGCTA GCCTGA
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Protein sequence | MTNTVTPSRA KTSAMIASIA EPGQKTASAP FGHALVALAE QDPTVVGLSA DLAKYTDMHI FRDRFPERFF QVGMAEQVLL GAAAGMAETG LVPFVSTYSV FAARRAYDFL CLDIAEPNLN VNVVGGLPGL TTGYGPSHQA TEDMAIFRGM PNLTIVDPCD SVDIEQAVPQ LAAAAGPTYL RLLRGHVPTV LDEYDYTFEL GKASVLRGGH DVVLISSGLM TMRALQAATA LAAHKVDVAV VHTPTIKPFD AETVLAELNT DRLAVTLENH TIRGGLFETV ASAAVLAGVA KRVIPVALPD AFLDAGALPT LHRRYGLDVD SIVATVLDGL A
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