| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3319 |
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| Symbol | |
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| ID | 8448934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3648749 |
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| End bp | 3650923 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645042397 |
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| Product | Pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_003202637 |
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| Protein GI | 258653481 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0163319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00280093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCAAGA CGACTGAACT CAAGCCTCTC GCCCCCTGGG TGGAGCTGTC CTCCACCCAG
GCCGACTGGG ACGCCCTGGA CCCGGCCGTC CTGGACACCA TGCTGGCTCA GCTGCACCTG
ATCCGCGCCT TCGAGGAGGA GGTGCTGGTC CTGGCCGGCC AGAAACTGAT CAACGGGCCG
GCCCACTCCT CGATCGGCCA GGAGGGCGGA GCGGTCGGTT CGGTGCTGCC GCTGGGCGCC
GGCGACCAGG TCAACGGCTC GCACCGCGGG CACCACCAGT TCCTGGCCAA GGCGCTGGGC
TTCGTCGCCC CCGATGGCCT GAACCCGCGT GAGCCGCTCT CGGACAAGGT CCGAGAGGTC
CTGCACCGCA GCATGTCCGA GATTGCCGGG CTGTCCGACG GCTACTGCCG CGGGCGCGGC
GGCTCCATGC ACCTGCAGTG GATCGAGGCC GGCGGGATGG GCACCAACGC CATCGTCGGT
GGCGCGGTGC CGTTCGCCGC GGGCTTCGCC TTCGCCGACA AGCACGCCGA CACCACCAAC
GTCTCGGTCA CCTACTTCGG CGACGGCGCG GTCAACATCG GCTCCGTGCT GGAGACCATG
AACCTGGCCG CCGCGTGGAA GCTGCCGGTC TGCTTCTTCA TCGAGAACAA CCAGTACGCC
GTGTCCACCA CCGTGCAGGA GGCCACCGGC GACGATCGCC TCTCGGCCCG CGGGCTGGGC
TTCGGCATCC CCAGCTGGAA GGTCGACGGG ATGGACACCG TCGCGGTCTA CCTGGCGATG
CAGCAGGCCC TGGAGGTCAT GCGGCACGGC AACGGGCCGA CCGTGATCGA GGTCGACACC
TACCGTTACT TCCACCAGAA CGGTCCGTTC CCGGGCAGCG CGTTCGGCTA CCGCAGCAAG
GACGAGGAGC AGAGCTGGCG CGACCGGGAC CCGATCGCCA AGCTCGAGGG TCACCTGCTG
CGCCGCGGCC TGTACACCGA GGCCGAGCTG ACCGGGGTGC GCAAGTCCAT CAAGGCGGCC
CTGGGCGAGA TCGGCGCCCA GCTGGTCGAG CAGGACCCGA ACGGCAAGCC CGGCCAGCAG
CGGATCCGGC CCGAGCTGTG GCCGGACCCG GCCTTCCTGG ACGTCGGCAT CCGGGGCGAC
CTGTCCAGCC TCAAGGAGCT CACGGTCCGG GAGAACGACA GCTTCGCCGC CGACGAGCTG
GAGGATCGCA AGTTCGTCGA CGTCATCGCC GAGGTCATGC AGATCCGGAT GGACGAGAAC
CAGCGGGTCG TCGTGATGGG CGAGGACGTG CACCGGCTCA ACGGCGGTTC CCGGGGCGCC
ACCAAGGGCC TGCGGGAGAA GTTCGACGAC CGGGTGCTGG GCACCCCCAT CTCCGAGGCC
GCCTTCACCG GCCTGGGTGG CGGGCTGGCC CTGGACGGGC GCTTCTACCC GGTGGTCGAG
CTGATGTACG CCGACTTCAT CTGGGTGGCC GCCGACCAGA TCTTCAACCA GATCGGCAAG
GCCCGGCACA TGTTCGGCGG CGACCACGAC ATGCCGCTGC TGATGCGCAT CAAGATCGGT
ACCGGCACCG GTTACGGCTC GCAGCACTCG ATGGATCCGG CCGGCATCAT GGCCACCTCG
GTGGGCTGGC GGATCATCGC CCCGTCCTCG CCGATGGACT ACGTCGGTCT GATCAACGCC
GCGATGCACC TCAAGGACCC GGTCGTGGTT CTGGAGCACG ACGCCGACCT GTACAAGATC
ACCGGCCCGG CGCCGAAGAA GGACTGGAAC TACATCCTGC CCCCCGGCCA GGCGGCCGTC
CGCCGCGAGG GCAAGGACGT CACCGTCCTG ACCTACCTGT CGATGGTGAC CAAGTCGCTG
CAGGCGGCCG AGAAGTCCGG CGTCGACGCC GAGGTCATCG ACCTGCGGTG GCTGGACCGG
GCCAGCCTGG ACTGGGACGC GATCGAGCGG AGCATCAAGA AGACCAACAA GGTGCTCATC
GTCGAGCAGG GTTCGCTGGG CACCTCCTAC GGCGGGTGGC TGGCCGACGA GCTCCAGAAC
CGTTTCTTCG ACTGGCTGGA CGCGCCGGTG GGCCGGGTCA CCGGCAGCGA GTCCTCGCCG
AGCATCTCCA AGGTGCTCGA GGCGGCCGCC CTGGCCGGGG TCGACGACAT CGTCGACGCG
CTCAAGAACA TCTGA
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| Protein sequence | MPKTTELKPL APWVELSSTQ ADWDALDPAV LDTMLAQLHL IRAFEEEVLV LAGQKLINGP
AHSSIGQEGG AVGSVLPLGA GDQVNGSHRG HHQFLAKALG FVAPDGLNPR EPLSDKVREV
LHRSMSEIAG LSDGYCRGRG GSMHLQWIEA GGMGTNAIVG GAVPFAAGFA FADKHADTTN
VSVTYFGDGA VNIGSVLETM NLAAAWKLPV CFFIENNQYA VSTTVQEATG DDRLSARGLG
FGIPSWKVDG MDTVAVYLAM QQALEVMRHG NGPTVIEVDT YRYFHQNGPF PGSAFGYRSK
DEEQSWRDRD PIAKLEGHLL RRGLYTEAEL TGVRKSIKAA LGEIGAQLVE QDPNGKPGQQ
RIRPELWPDP AFLDVGIRGD LSSLKELTVR ENDSFAADEL EDRKFVDVIA EVMQIRMDEN
QRVVVMGEDV HRLNGGSRGA TKGLREKFDD RVLGTPISEA AFTGLGGGLA LDGRFYPVVE
LMYADFIWVA ADQIFNQIGK ARHMFGGDHD MPLLMRIKIG TGTGYGSQHS MDPAGIMATS
VGWRIIAPSS PMDYVGLINA AMHLKDPVVV LEHDADLYKI TGPAPKKDWN YILPPGQAAV
RREGKDVTVL TYLSMVTKSL QAAEKSGVDA EVIDLRWLDR ASLDWDAIER SIKKTNKVLI
VEQGSLGTSY GGWLADELQN RFFDWLDAPV GRVTGSESSP SISKVLEAAA LAGVDDIVDA
LKNI
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