Gene Namu_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3220 
Symbol 
ID8448834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3549387 
End bp3550064 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID645042299 
Producthypothetical protein 
Protein accessionYP_003202540 
Protein GI258653384 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000147691 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000408835 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGAGC TCGTCTGCTA CAGCGACATC GTCTGCCCGT GGGCCACCGT GATGGTGATC 
CGGCTGATCG ATGCGCGGGA CCGGGCCGGT GCCCAGAACG ACCTGGTCAT CACCCACCGG
GCCTGGCCGC TGGAGCTGCA ACACCAGCGG CCGATCCCCC GGCGGGTCGT CGACGCCGAG
ATCCCGCTGT GCGCCACGCT GACCCCGCAG TTCAACTGGT CGTTGTGGCA GGGCCGGCCC
GAGGAGTACC CGGTCACGGT GCTCCTGGCC CTGGAGGCCG TGCAGGCCGC CGCCGCCCAA
AGTCCCACCA GCGCCGAGCA ACTCGACCTC GCCCTGCGGC GGGCCTTCTT CGTGCACTCG
CGGTGCATCG CGATGCGACA CGAGATCCTG GCCGCCGCCC GCACGTGCGA CACCGTCGAC
GTGGACCGGC TCGCGGCCGA TCTGGACGCG GGGACCTACC GGTCCGTGCT CTCCGCGCAC
GTCGCGCAGG CCCGCGCCGA CAACGTCACG TGCAGCGGCA CCCTGGTCCG CGCCGATGGC
ACCATGGTCT GCAATCCGGC TACCGAAACC GCTTGGATCG GTGGCACTTT CCCCCGGGGC
ACGCCGATCG TGGTGGCCGA CGACCCGGCG GTGTTCGATC GGATCATCGC CGAGTCCCTG
GTGCCGGCGT GGTCATAG
 
Protein sequence
MPELVCYSDI VCPWATVMVI RLIDARDRAG AQNDLVITHR AWPLELQHQR PIPRRVVDAE 
IPLCATLTPQ FNWSLWQGRP EEYPVTVLLA LEAVQAAAAQ SPTSAEQLDL ALRRAFFVHS
RCIAMRHEIL AAARTCDTVD VDRLAADLDA GTYRSVLSAH VAQARADNVT CSGTLVRADG
TMVCNPATET AWIGGTFPRG TPIVVADDPA VFDRIIAESL VPAWS