Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3130 |
Symbol | |
ID | 8448744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3450267 |
End bp | 3451001 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645042211 |
Product | Ribonuclease H |
Protein accession | YP_003202452 |
Protein GI | 258653296 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00152106 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.115536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGACGG TCCGGCGCCC GCACCTGCGG GTGGAAAAGC AGCTCATGCG CGACGGCGTG ACCCGGCTGG CCGCGATGGA CGAGGTCGGC CGCGGCGCGC TGGCCGGTCC GGTCAGCGTC GGGGTGGTCG TGGTCACCCC CGAGGTCAGG CGGGTGCCGC CCGGGCTGGC CGACTCCAAA CTGCTCACCC CGGAGGCCCG GCAACGGCTG GTCGCGCCGG TGCGCCGGTG GGTGCAGGAG TACGCGGTCG GCCACGCCAG CGCCGACGAG ATCGACGCGA TCGGCATCAT CGCCGCCCTG CGCACCGCCG GCCGGCGGGC GTTGGCCGAG CTGTCCGGGC CGGTGGACGC CATCCTGCTC GACGGCAACC ACAACTACCT GCGGGAGCCG GCCGCTCCGG CCGCCGCCCC CGACCCGCTG GCCGCGCCGT TGTTCGAGGT TGCCGCCGAG GCGGTCGCGC CGGCCGACCC GGAGCCGGCC GTGCACGTGC GGATCAAGGC GGACATGACC TGTGCCGCGG TGGCCGGGGC CAGCGTGCTG GCCAAGACCG AACGGGACGC GATCCTGACC GGGCTCGGAC CCGACTACCC GGCCTACGGG TTCGCGGTCA ACAAGGGGTA CGGCACCCCC GAACACCTGG CCGCGCTGCG CGAACACGGG CCATGTGCCG TGCACCGGCG CAGCTGGCGG CTACCGTGCG GGGAACAGGT GGCCGAAGGG ATGATGTTCT CGTGA
|
Protein sequence | MVTVRRPHLR VEKQLMRDGV TRLAAMDEVG RGALAGPVSV GVVVVTPEVR RVPPGLADSK LLTPEARQRL VAPVRRWVQE YAVGHASADE IDAIGIIAAL RTAGRRALAE LSGPVDAILL DGNHNYLREP AAPAAAPDPL AAPLFEVAAE AVAPADPEPA VHVRIKADMT CAAVAGASVL AKTERDAILT GLGPDYPAYG FAVNKGYGTP EHLAALREHG PCAVHRRSWR LPCGEQVAEG MMFS
|
| |