Gene Namu_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3130 
Symbol 
ID8448744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3450267 
End bp3451001 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content74% 
IMG OID645042211 
ProductRibonuclease H 
Protein accessionYP_003202452 
Protein GI258653296 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00152106 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.115536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGG TCCGGCGCCC GCACCTGCGG GTGGAAAAGC AGCTCATGCG CGACGGCGTG 
ACCCGGCTGG CCGCGATGGA CGAGGTCGGC CGCGGCGCGC TGGCCGGTCC GGTCAGCGTC
GGGGTGGTCG TGGTCACCCC CGAGGTCAGG CGGGTGCCGC CCGGGCTGGC CGACTCCAAA
CTGCTCACCC CGGAGGCCCG GCAACGGCTG GTCGCGCCGG TGCGCCGGTG GGTGCAGGAG
TACGCGGTCG GCCACGCCAG CGCCGACGAG ATCGACGCGA TCGGCATCAT CGCCGCCCTG
CGCACCGCCG GCCGGCGGGC GTTGGCCGAG CTGTCCGGGC CGGTGGACGC CATCCTGCTC
GACGGCAACC ACAACTACCT GCGGGAGCCG GCCGCTCCGG CCGCCGCCCC CGACCCGCTG
GCCGCGCCGT TGTTCGAGGT TGCCGCCGAG GCGGTCGCGC CGGCCGACCC GGAGCCGGCC
GTGCACGTGC GGATCAAGGC GGACATGACC TGTGCCGCGG TGGCCGGGGC CAGCGTGCTG
GCCAAGACCG AACGGGACGC GATCCTGACC GGGCTCGGAC CCGACTACCC GGCCTACGGG
TTCGCGGTCA ACAAGGGGTA CGGCACCCCC GAACACCTGG CCGCGCTGCG CGAACACGGG
CCATGTGCCG TGCACCGGCG CAGCTGGCGG CTACCGTGCG GGGAACAGGT GGCCGAAGGG
ATGATGTTCT CGTGA
 
Protein sequence
MVTVRRPHLR VEKQLMRDGV TRLAAMDEVG RGALAGPVSV GVVVVTPEVR RVPPGLADSK 
LLTPEARQRL VAPVRRWVQE YAVGHASADE IDAIGIIAAL RTAGRRALAE LSGPVDAILL
DGNHNYLREP AAPAAAPDPL AAPLFEVAAE AVAPADPEPA VHVRIKADMT CAAVAGASVL
AKTERDAILT GLGPDYPAYG FAVNKGYGTP EHLAALREHG PCAVHRRSWR LPCGEQVAEG
MMFS