| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3086 |
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| Symbol | |
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| ID | 8448700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3400793 |
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| End bp | 3401524 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645042168 |
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| Product | phosphoribosyl isomerase A |
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| Protein accession | YP_003202409 |
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| Protein GI | 258653253 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
[TIGR01919] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000449429 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000252875 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCTTCG AACTTCTCCC CGCCGTTGAC GTCGCCGACG GCCAGGCCGT GCGCCTGGTC
CAGGGCCGGG CCGGTAGCGA AACCCATTAC GGCGCACCGT TGGACGCGGC CCTGGCCTGG
CAGTCCGACG GCGCCGAATG GATCCACCTG GTCGACCTGG ACGCCGCCTT CGGGCGCGGC
TCCAACGCGG CCCTGCTGGC CGAGGTCGTC GGCCGGCTGG ACATCAAGGT GGAGCTGTCC
GGCGGCATCC GGGATGACGA GTCGCTGGCC GCGGCCCTGG CCACCGGCTG CACCCGGGTG
AACATCGGCA CCGCCGCACT GGAGCAGCCG GACTGGTGCG CCTCGGCGAT CGCCCGCTAC
GGCGATCAGG TCGCGGTCGG CCTGGACGTG CGGGGCACCA CGCTGGCCGC CCGCGGTTGG
ACCCAGGACG GCGGCGACCT GTGGCAGGCG CTGGCCCGGC TGGACGCCCA GGGCTGCTCC
CGGTACGTGG TGACCGACGT CACCAAGGAC GGCACCCTGC GCGGGCCCAA CCTGGACCTG
CTGCGAGAGG TCTGCGCCGT CACCAGCGCC CCGGTCGTGG CCTCCGGCGG GGTGTCCTCG
CTCGACGATC TGATCGCGCT GGCCGGCCTG CGCTCGATCG GGGTCGAGGG CGCGATCGTC
GGCAAGGCGC TCTACGCCGG GGCGTTCACG CTGCCGCAGG CGCTGGCGGC CGTGCACGAC
CCGGCCGGCT GA
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| Protein sequence | MSFELLPAVD VADGQAVRLV QGRAGSETHY GAPLDAALAW QSDGAEWIHL VDLDAAFGRG
SNAALLAEVV GRLDIKVELS GGIRDDESLA AALATGCTRV NIGTAALEQP DWCASAIARY
GDQVAVGLDV RGTTLAARGW TQDGGDLWQA LARLDAQGCS RYVVTDVTKD GTLRGPNLDL
LREVCAVTSA PVVASGGVSS LDDLIALAGL RSIGVEGAIV GKALYAGAFT LPQALAAVHD
PAG
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