| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3040 |
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| Symbol | |
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| ID | 8448653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3338601 |
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| End bp | 3339866 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645042124 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003202366 |
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| Protein GI | 258653210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000772165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00538259 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTGATTG TGGATGACTG GGCGGAGATC CGTCGGTTGC ATCGGGCGGA GGGGATGCCG
ATCCGGGCGA TCGCTCGGCG TCTGGGGTGT TCGAAGAACA CTGTGAAGCG GGCGTTGGCC
GCGCAGGGTC CGCCGAGGTA TGAGCGGGCG ACGGTCGGGT CGGCCGTTGA TGCGTTCGAG
CCGGCCATCC GGGCGTTGTT GGCGGAGTTT CCGTCGATGC CGACGTCGGT GATCATGGAG
CGGGTTGGGT GGTCGCGGGG CCGCACGGTG TTCTTCGAGC GGGTCGCGGT GTTGCGGCCG
TTGTTCGTGC CGCCGGATCC GGCGTCGCGG ACGGAGTATG GGCCGGGGCA GTTGGCGCAG
TGCGATCTGT GGTTTCCGCC GGTGGACGTG CCGGTGGGGT TCGATCAGGT CGCCCGTCCA
CCGGTGCTAG TGATGGTGTC GGGGTTCTCA CGGGTCATCA CGGCCAGGAT GCTGCCGTCG
CGGCAGTCTG CGGATCTACT GGCTGGGCAT TGGGAGCTGC TGTTGGGGTG GGGTCGCTTG
CCCAGAGCCC TGGTCTGGGA CAACGAGGCC GCGGTCGGCC GGTGGCGCGG CGGCCGACCG
GAACTGACCG AACCGATGAA CGCCTTCCGT GGAACGTTGG GTATCAAGGT CGTGCTCTGC
GCGCCGCGCG ACCCTGAGTC CAAGGGCCTG GTCGAGCGGG CGAACGGCTA TCTGGAGACC
TCATTCCTGC CCGGCCGCAC GTTCACCTCC CCGGCTGACT TCAACGCCCA GCTGGCTGCG
TGGCTGGTCC GGGCGAACCA GCGGCAACAC CGCCGGCTCG GGTGCCGGCC CATCGACCGG
TGGGCGGCGG ACCTGGCCGC GATGATGGCG ATGCCACCGG TTGCGCCGGT GGTGGGCTGG
ACCGCGTCGC CGCTGCTGCC TCGTGATCAT TACGTCCGCG TCGATTCCAA CGACTATTCG
GTGCATCCCG GTGTGGTCGG TCGACGGGTG CAGGTGCTGG CCGATCTGGA TCAGGTCGTG
GTGACCTGCG CCGGCACGGT CGTGGCCGCG CACGAACGGT GCTGGGCGCG GCGGCAGACC
ATCACCGATG CCGACCATGC CCAGGCCGCG GCGGCGTTAC GCGCCGCCCA CCGCGAACGG
GTGCGACGGC CGGTAGAGAC CGACGTCGCG GTCCGCGAAC TCGCCGATTA CGACCGCATC
TTCGGCCTGC AGGACGACCT CGACGATCAT CCCAGCGTCG ACGTGGCCGA CGGTGAGGTC
GCCTGA
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| Protein sequence | MLIVDDWAEI RRLHRAEGMP IRAIARRLGC SKNTVKRALA AQGPPRYERA TVGSAVDAFE
PAIRALLAEF PSMPTSVIME RVGWSRGRTV FFERVAVLRP LFVPPDPASR TEYGPGQLAQ
CDLWFPPVDV PVGFDQVARP PVLVMVSGFS RVITARMLPS RQSADLLAGH WELLLGWGRL
PRALVWDNEA AVGRWRGGRP ELTEPMNAFR GTLGIKVVLC APRDPESKGL VERANGYLET
SFLPGRTFTS PADFNAQLAA WLVRANQRQH RRLGCRPIDR WAADLAAMMA MPPVAPVVGW
TASPLLPRDH YVRVDSNDYS VHPGVVGRRV QVLADLDQVV VTCAGTVVAA HERCWARRQT
ITDADHAQAA AALRAAHRER VRRPVETDVA VRELADYDRI FGLQDDLDDH PSVDVADGEV
A
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