| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3022 |
|---|
| Symbol | |
|---|
| ID | 8448635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3311434 |
|---|
| End bp | 3312744 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 645042106 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202348 |
|---|
| Protein GI | 258653192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.035487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00076549 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGG ATCCCCGGGC GCCGGAGCGG GCGCCCACCC GTACCGACCT GACCTGGCTG
CGGCACCGGT CGCGGGTGAC CGCCGGCGCG GGATCGGGGA GCCGGTCCGG TTCGGCCGGG
CCGGGCCGAT CCGGCTCGGC GCTGGCCGAT TTCGTCGCCG GGCGGTCCAC CGCGCGCCGA
CCGGCGGCCG CGAGCCGACC GGCACCGGCG CCCGCGCCTG CGCCGGCGGC GGCGGTGCCC
GCGCCCTCGA CGCCGGCGCC CGCGAGACCG GCGCCCGCGC CGGCGGCGGC GGCCTCGTCC
TCGCTGGACC TGTCCTCGCC GTTGGACCTG TCGGCCCCGG CCGCGCCGCC GAGTTCGGGC
TCGTTGGACC TGTTCGGTCC CAGTGCCCCG GCGGCAAGCC CGCCGCCCCC CGCGCCGCCC
GGCACCGGAT CGAGCTCGTT GGACCTGTCG GAACCGCTGA CGCCGCCCGC GGTCCCGGCC
CGGGCGCCGT CCGGGTCGAC CTCGTTGGAT CTGGGCGGGC CGGCGGCACC GCCCCCCGCC
CGGCCGACCG GCAGCACCTC GCTGGACCTG GGCCCGACCC CGCTCCGGAC CCCGTCGAGC
ACCCCGTCGA GCAGCTCGTC GAACACCGGG CCCGCCGCCG GCTCGGCGAC CTCGCTCGAC
CTGTCCGGTG CGCCGGCACC CCCCGCGGCG CCGGCCACGG CCGCGCCGTC GATGCGGCGA
CCGGCCAGCA CCTGGCAGGA ACCCCGCACC ACGCCCGGGG TGCCGACCAC CCTGAACCCG
CGCCGGCCGA CCGTCACCCT CACCCGGGTG CAGTCCGGCG TGGGCACCTT GACGTTCGAG
GCGATCATCA CCGCCGCGGC CGGGGACCTG AGACTGGGCT GCGCCTACCA ATTCCGGTCG
GGCCTGGCCT CGACGGTGGC GCACCACACG GGCCGGCGGT ACGCGCCGCC CGGGCAGACC
CGCCGCCCGC TGATCGTGGC CAGCCGGCAG GACTACGAGC GGATCGCCGT CGACCTGCGT
CAGGTCACCG ACCTGGAACG CCTCGTCGTC TACGCGTTCA GCGGCAACGG GCAGCCGCTG
CAGTGGGGCG GCACGCTGAT CGCGACCACC TTCGGCGGCG ATCGCATCGA GATGCCCATC
GAACTGGCCC CGGCTCCGGC GGTCGCCGTC CTGGCCTCGG TCTACAACAT CGGCGGCGAA
CTGATCATCC GGTCGGAAAT GGACCTGATC GGCAGCACCG TGCGGGAGGC CTGCCGCGGG
TACGGGTTCG ATCGGATCAG CTGGGTGGAC GACACCACCC CGATCGACTG A
|
|---|
| Protein sequence | MTVDPRAPER APTRTDLTWL RHRSRVTAGA GSGSRSGSAG PGRSGSALAD FVAGRSTARR
PAAASRPAPA PAPAPAAAVP APSTPAPARP APAPAAAASS SLDLSSPLDL SAPAAPPSSG
SLDLFGPSAP AASPPPPAPP GTGSSSLDLS EPLTPPAVPA RAPSGSTSLD LGGPAAPPPA
RPTGSTSLDL GPTPLRTPSS TPSSSSSNTG PAAGSATSLD LSGAPAPPAA PATAAPSMRR
PASTWQEPRT TPGVPTTLNP RRPTVTLTRV QSGVGTLTFE AIITAAAGDL RLGCAYQFRS
GLASTVAHHT GRRYAPPGQT RRPLIVASRQ DYERIAVDLR QVTDLERLVV YAFSGNGQPL
QWGGTLIATT FGGDRIEMPI ELAPAPAVAV LASVYNIGGE LIIRSEMDLI GSTVREACRG
YGFDRISWVD DTTPID
|
|---|
| |