Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2960 |
Symbol | |
ID | 8448573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3244174 |
End bp | 3245532 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645042045 |
Product | protein of unknown function DUF245 domain protein |
Protein accession | YP_003202287 |
Protein GI | 258653131 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000286754 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00476046 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGCGTC GGATCATGGG CATCGAGACC GAGTTCGGCA TCACCTGTAC CTTCCACGGG CAACGCCGGT TGAGCCCGGA CGAGGTGGCC AGATACCTGT TCCGGCGGGT GGTGTCGTGG GGCCGCTCGT CCAACGTGTT CCTGCGCAAC GGCTCACGGC TGTACCTGGA CGTGGGCTCG CACCCGGAGT ACGCGACCGC CGAATGCGAC GAGCTGCCGG TGCTGATCGC GCACGACAAG GCCGGCGAAC GGATCCTGCA GGACCTGGTC GTCGACGCCG AGACCCGGCT GGCCGAAGAG GGCATCGGCG GGGACATCTA CCTGTTCAAG AACAACACCG ACTCGGCCGG CAACTCCTAC GGCTGCCACG AGAACTTCCT GATCGCCCGG GGCGGCGAGT TCGCCAAGAT CGCCGACGGG CTCATCCCGT TCCTGGTCAC CCGGCAGCTG ATCGCCGGCG CCGGCAAGGT GCTGCAGTCG CCGCGCGGTG CCTCGTACTG CCTGTCCCAG CGGGCCGACC ACATCTGGGA GGGCGTCTCC TCGGCGACCA CCCGGTCCCG GCCCATCATC AATACCCGCG ACGAGCCGCA CGCCGACGCC GAGCGGTACC GGCGGCTGCA CGTGATCGTG GGCGACTCCA ACATGAGCGA GACGACCACC CTGCTGAAGG TCGGCACCGC CGCGCTGGTG CTGGAGATGA TCGAGTCCGG CGTGCCGATG CGCGACTTCA CCTTCGAGAA CCCCATCCGG GCCATCCGGG AGATCTCCCA CGACACCACC GGCCGCAAGG CCGTCCGGCT GGCCGGCGGC GGCGACATCA GCGCCCTGGA CGCGCAGACC GAGTACTACG AGAAGGCGGC CGCGTTCGTC GCCAACCGGG GCACCGACCC GGTCACCCAC CAGGTGCTGG ACCTGTGGCG GCGCACCCTG GAGGCGGTGC AGACCCAGGA CTTCACCAAG GTCGACACCG AGATCGACTG GATCATCAAG AAGAAGCTGA TCGATGCCTA CGCGGCCAAG CACGGCCTGG ACCTGACCCA TCCCCGGATC GCCCAGCTCG ACCTGACCTA TCACGACGTG CGCCCCGGCC GGGGCCTGCA CTCCCTGCTG GCCGCCCGCG GCCGGGCCGC GCGGGTCGTC ACCGACGGGC AGATCACGAC CGCGATGACG GTGCCGCCGC AGACCACCCG CGCCCGGCTG CGGGGCGAGT TCGTCGCCGC CGCCCAGGAC GCCGGCCGCG ACTACACCGT CGACTGGGTC CACCTCAAGC TCAACGACCA GGCCCAGCGG ACGGTCCTGC TCAAGGACCC GTTCCGGTCC ACCGACGACC GCGTCACCAA GCTGATCGAG GCCATGTAG
|
Protein sequence | MQRRIMGIET EFGITCTFHG QRRLSPDEVA RYLFRRVVSW GRSSNVFLRN GSRLYLDVGS HPEYATAECD ELPVLIAHDK AGERILQDLV VDAETRLAEE GIGGDIYLFK NNTDSAGNSY GCHENFLIAR GGEFAKIADG LIPFLVTRQL IAGAGKVLQS PRGASYCLSQ RADHIWEGVS SATTRSRPII NTRDEPHADA ERYRRLHVIV GDSNMSETTT LLKVGTAALV LEMIESGVPM RDFTFENPIR AIREISHDTT GRKAVRLAGG GDISALDAQT EYYEKAAAFV ANRGTDPVTH QVLDLWRRTL EAVQTQDFTK VDTEIDWIIK KKLIDAYAAK HGLDLTHPRI AQLDLTYHDV RPGRGLHSLL AARGRAARVV TDGQITTAMT VPPQTTRARL RGEFVAAAQD AGRDYTVDWV HLKLNDQAQR TVLLKDPFRS TDDRVTKLIE AM
|
| |