Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2940 |
Symbol | |
ID | 8448553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3219441 |
End bp | 3221582 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645042025 |
Product | Prolyl oligopeptidase |
Protein accession | YP_003202267 |
Protein GI | 258653111 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000682776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000230055 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCCAGC CCCTCCGCTA CCCGCCCGCC GATCGGGACG AGGTCGTGCA GGTGCTCCAC GGCCATCGGG TGGCCGACCC GTACCGGTAC CTGGAGGATC CCGACGCGGA CCGGACCCGG GCCTTCGTCG ACGCCCAGAA CGCCCTGTCC CGGCCCATTC TCGATGCGCT GCCGGCGCGC GAGCCGCTGC TGGCGATGAC CACCGCGCTG CTCACCGCGC CCCGGCGCGG GGTTCCCTGG GAGCGGGGCG GCCGGTACTT CGTGGTGGCC AACCCCGGCG AGCTGGACCA GGACCAGCTG TTCTGGGCGC CGAGCCTGGA CGAGCTGCTC GACGCGCCGA CCCTGCTGCT GGACCCCAAC GACCTGTCCG CCGACGGCAC CGTCGCGCTC ACCGCGGCCC GGGTCAGCCC GGACGGGCGG CTGCTGGCCT ACGCGGTGTC CGAGGGTGGC TCGGACTGGC GGACCATCCG GGTCCGCGAG GTGGCCGGCG GGGTCGATCG GCCGGACGAG CTGCGCTGGA CCAAGTGGGT CGACCCGACC TGGCTGCCGG ACGCCTCGGG GTTCCTGTAC TGGCGCTATC CGGAGCCGGC GGGCGCCGGC CGCGGCGGCG CGCTGACCGA CGCGATGGGC GCTGGTGAAC TCGTGCTGCA CCGGTTGGTC GCCGGCTCCG GGCCACCGCA GGCGGCCGAT CGGGCGGCCA ACCCGGGACC GGACGAGGTG ATCTGGACGC CGCCGGATCG GGACTGGCTG GCCGATCCGT GGGTCGCCCC CGACGGCCGG TGGCTGGTGC TGACCAGCAG CCCGGGCACC GATTCCCGCA GCCTGATCTG CGCCCACCGG CTGCGCACCG ACCAGGGGCG GGTGGTCATC GACCCCGCCG CGGTGCCGGT GGTCGGCGAA CTCGCCGACG CCCACCACGT CGTCGGCAGC GACGGCGACA CGCTCTACCT GCGCACCGAG CGGGACGCGC CGCGCGGCCG GCTGGTCGCG GTGGAGCTGG CCACGGACGC CCCGACGGCG GCTTCCTGGC GGACCGTGGT GCCCCAGCAC GAGCAGGACG TCCTGGTCAG CGCCCATCCG GCGCGCGACT GCTTCGCCCT GGTCTGGTCC ACCGACGCCG CCCACCGGCT GCAGGTGGTC GACCGGACCG GCGCTCACCG GGACTGGCCG GCGTTGCCCG CGCCGATCTC GCTGATCGCG GTGAACACCC GGGCCGGCTC GCCGGAGATC CTGCTCGGGG TCGGCTCGTT CACCGCGCGG ACCCGCTCGT TCCGGCTCGA GACCGGCCCG TCGATCACCC TGACGGCGCT GCCCGGGCCG GGTGGCGACG TGCCGCTGCC GGAGCTGGTC ACGCAGCGCC GGCGGACCGT CTCCAGCGAC GGCGTCGAGG TCCCGATGAC CGTGCTCCGC CGGGCCGACC TGGCCCCGGG TCCGGCCCCG ACCCTGCTGT ACGGGTACGG CGGGTTCGAC ATCGCGCTAC TGCCGTCGTT CTCGGCGATG TTCGCGGCCT GGGTCGCCGC CGGCGGGGTG CTGGTGGTGA CCAACCTGCG CGGCGGCGGC GAGTTCGGCG CCGACTGGCA CCGGGCCGGG ATGGGCCACC GCAAGCAGCA GGTGTTCGAC GATCTGATCG CCTGCGCCCA GGCGCTGATC GACTCGGGCG ACACGACCCC GGCGCAGCTG GCCGTGCACG GCCGATCCAA CGGCGGGCTG CTGGTCGGCG CGGTGCTGAC GCAACGACCG GAGCTGTTCG CGGCCGCCCT GCCCACCGTC GGCGTGCTGG ACATGCTGCG CTTCCACCTG TTCACCATCG GCTGGGCGTG GACCACCGAC TACGGCTCGC CCGAGGACGC CGACGATTTC GCCGCGCTGC TGGCCTACTC ACCGCTGCAC CGGCTGACCC CGAGCACCCG CTACCCGGCC ACTCTGATCT GCACCGGGGA CCACGACGAC CGGGTGGTCC CGGCGCACTC GCTCAAGTTC GGCGCGCAGC TGCAGCACTG TCAGGCCGGG CCCGCCCCGG TGCTGCTGCG GGTGGACACC CGGGCCGGTC ACGGAATGGG CAAGCCGGCC CGCGCGTTGG CGCTGGAGTA CGCCGACCAG CTGGCGTTCG CCGCGGCGCA CACCGGGTTG GCACCGGTCT GA
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Protein sequence | MSQPLRYPPA DRDEVVQVLH GHRVADPYRY LEDPDADRTR AFVDAQNALS RPILDALPAR EPLLAMTTAL LTAPRRGVPW ERGGRYFVVA NPGELDQDQL FWAPSLDELL DAPTLLLDPN DLSADGTVAL TAARVSPDGR LLAYAVSEGG SDWRTIRVRE VAGGVDRPDE LRWTKWVDPT WLPDASGFLY WRYPEPAGAG RGGALTDAMG AGELVLHRLV AGSGPPQAAD RAANPGPDEV IWTPPDRDWL ADPWVAPDGR WLVLTSSPGT DSRSLICAHR LRTDQGRVVI DPAAVPVVGE LADAHHVVGS DGDTLYLRTE RDAPRGRLVA VELATDAPTA ASWRTVVPQH EQDVLVSAHP ARDCFALVWS TDAAHRLQVV DRTGAHRDWP ALPAPISLIA VNTRAGSPEI LLGVGSFTAR TRSFRLETGP SITLTALPGP GGDVPLPELV TQRRRTVSSD GVEVPMTVLR RADLAPGPAP TLLYGYGGFD IALLPSFSAM FAAWVAAGGV LVVTNLRGGG EFGADWHRAG MGHRKQQVFD DLIACAQALI DSGDTTPAQL AVHGRSNGGL LVGAVLTQRP ELFAAALPTV GVLDMLRFHL FTIGWAWTTD YGSPEDADDF AALLAYSPLH RLTPSTRYPA TLICTGDHDD RVVPAHSLKF GAQLQHCQAG PAPVLLRVDT RAGHGMGKPA RALALEYADQ LAFAAAHTGL APV
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