| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2896 |
|---|
| Symbol | |
|---|
| ID | 8448509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3166714 |
|---|
| End bp | 3168480 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645041983 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_003202225 |
|---|
| Protein GI | 258653069 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.217438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000124211 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCGA TGCCCAGCGA CGTTCACCGT GACAGTCACC GCGAGCCCGA CGAGCAGGTC
GACCTGCTGA TCCTGGGCAG CGGAGCGGGC GGCCTGTCCG CGGCCGTGAC CGGCGCCCAC
GAGGGCCTGT CCGTCCTGGT GCTGGAAAAG ACCGAGTTCC TGGGCGGCAC CACTGCCTAC
TCGGCCGGCA CCTGCTGGGT CCCGGGCAAC CACTACCAGC GGGCCGCCGG GATCACCGAC
GACGCCCAGG TGGCCAGCGG CTACCTGGAT CGGCTGGTCG GGGACAAGGC GCCGCGCGAG
GTCCGCGAGT CCTACCTGGC TCACGGCGGC GAGGCCATCG ACTACTTCGA CGCGCTCGGC
GTGAAGTTCT GGCATTCCGC GACCGTCGTC GATTACCACC CCGAGATCGA AGGCGCCAGC
CTGGGCGGTC GCGCGCTGGA ACCGCAGACC TTCGACGGGC GCCTGCTCGG CCCGGACGAC
TTCAGCCGGG TCCGGCCGCC GGTGCCCGAG TTCGCGCTCT TCGGCGGCAC CATGATGGTG
CGCCGGGCCG AGGTCAACCG GCTGCTGACC TTACTCAAGG GCTCGCCCCG AGCGCTGCCG
CTGGCCGGCC GGCTGGGCGC CCGGTGGGCC ACCGATCGGC TGCGGTACCG CCGCGGCACC
CGGCTGGCGA TGGGAAACGC TCTGGTCGCC AACCTTTTCC ACCAGCTCAA GCAGCACGGC
GGGCGGGTGT GGTTCACCGC CACCGCGACC CGGCTGGTGA CCGACGAGAC CGGCCGGGTC
ACCGCGGCGA TCGTCGCCTA CCAAGGTCAG GAGCGGCGGA TCCAGGTGCG CCGCGGCGTC
GTGCTGGCCG GGGGCGGGTT CTCGGCCAGC ACCCGGTGGC GGCGCGAGTT CCTGCCCGAA
CCGACCCCGC AGTACACCCG GGCGAGTGAG GGATCCACCG GCGACACCCT TTCCCTGGGC
ATGGATGTCG GGGGTGTGCT GAGCGCACCG CAGGACGACA ACGCGTTCTG GTTCCCCAGC
TCCGTCGGGC GGCGCAAGGA CGGCTCGACC GCGGTGTTCC CGCACATCTG GGACCGCAGT
AAGCCGGGCA TCGTCGCGGT GGGCGCGGAC GGCCGCCGGT TCGTCGACGA GTCGGTGTCC
TACCACCGGT TCGTCCGGGC CATGTACGCC AGCGGTACCG TGCCGGCCTG GTTGATCATC
GATTCGCGGG CGCTGCATCG CTACGGCTTG GGCCTGATCC GGCCCAAGCT GCCCCAGGCG
TACCTGCGCA AGTACCTGCA GTCGGGGTAC CTGCACCGCG CGCCGAGTAT CGGTGAGCTG
GCCGTCTCGA TCGGCGTGGA CGCCGCCGGG CTGGCCCGCA CCGTCGCCGA CCACAACCGG
TTCGCCGCGA CCGGCGTCGA CGACGAGTTC GGCAAGGGCA CCAGCCCGTT CGGCCGGCAG
TACGGCGACC CGGAGCACAC ACCCAACCCC TGCCTCGGGC CGATCGACCA GGCGCCCTTC
TACGCGATCG CGCTGGTGCC GACCCCGCTG GGCACCTCGC TCGGACTGCG CACCAACGCC
GACAGCCAGG TCCTGAACGC CGCCGGCGAT CCGATCGTGG GCCTGTACGC CTGCGGGAAC
GACGCCGCCT CGATGAGCGC CGCGGAATAC CCCGGCGCCG GCTGCCAGGT CGGCGGCGGC
CTCATCTTCG GCTACGTCGC GGCCCGGCAC GCCGCCCGCG CGGCCACCGA CATCACCTCC
ACCCCCGCAA CTCAGGAGAT CCGATGA
|
|---|
| Protein sequence | MPPMPSDVHR DSHREPDEQV DLLILGSGAG GLSAAVTGAH EGLSVLVLEK TEFLGGTTAY
SAGTCWVPGN HYQRAAGITD DAQVASGYLD RLVGDKAPRE VRESYLAHGG EAIDYFDALG
VKFWHSATVV DYHPEIEGAS LGGRALEPQT FDGRLLGPDD FSRVRPPVPE FALFGGTMMV
RRAEVNRLLT LLKGSPRALP LAGRLGARWA TDRLRYRRGT RLAMGNALVA NLFHQLKQHG
GRVWFTATAT RLVTDETGRV TAAIVAYQGQ ERRIQVRRGV VLAGGGFSAS TRWRREFLPE
PTPQYTRASE GSTGDTLSLG MDVGGVLSAP QDDNAFWFPS SVGRRKDGST AVFPHIWDRS
KPGIVAVGAD GRRFVDESVS YHRFVRAMYA SGTVPAWLII DSRALHRYGL GLIRPKLPQA
YLRKYLQSGY LHRAPSIGEL AVSIGVDAAG LARTVADHNR FAATGVDDEF GKGTSPFGRQ
YGDPEHTPNP CLGPIDQAPF YAIALVPTPL GTSLGLRTNA DSQVLNAAGD PIVGLYACGN
DAASMSAAEY PGAGCQVGGG LIFGYVAARH AARAATDITS TPATQEIR
|
|---|
| |