| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2703 |
|---|
| Symbol | |
|---|
| ID | 8448315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2960427 |
|---|
| End bp | 2962145 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645041795 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202038 |
|---|
| Protein GI | 258652882 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000154872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00558917 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA TCCGTTCGAC GCCGGTCGGG ATCATCGACT CCCCCGGCCT CGTCTCGGTC
CTGACCGCGG CCGGGATCCC CGTGGTCACC GGCAGCGACT TCCGCGATTC CGTCCGGGCG
ATCCGGGAAC GGTCCAAGCA GGCGCGGTCA GCGGACGAGG TCCCGGTGAT CATCGCCCGC
TGGCGTCGGC AGCACGTCGG CATGGGCGCG TGGCTCAACT CGATCTCCGG ACACACCCCT
CCGGGTAAGC GCACCGTCGT CCTAATCGAC CCGGACGACC AGCCGCCGAC CATCACCGGC
GCCGAGATCC TGCCCCTGCC GGCGAACCTG TCGGCGCTGG TGACGGCCGC CGGCTTCGAC
GACCACCCGA CCTACTCCGA CAAGACCTTG CACAGCGACG GGTCCGTCCA CGAGAACGCC
GCCGACTTCC AGATCCCGGA TCTGGACGAC GATCCGGAAT GGACGCAGCC GCCATGGCCG
GAGCCCGAGT TCGACGACTC CCCGTCCGAT CCGACGTCAC CTGCGGCCCG CGGGCCGGCC
GCAGGCGCAT CGATCCCGGC CTGGGCGATC GATGCCGACC CGCCGCCGGC CGGGCGGCCG
TCGGCAGCGC CGGTCCCCGC CTGGGCCGAG ATGCCGGTCG GCAGCGACGA ATCCGCCCCA
CCGACCCCTG TCAGCCAGTC CGACCTGGTC ACCCGCAGCG GGCCGGCCAT CCTGGACCCG
GAACCCGACC CGTTACCGGT CCTGGCCGCG GCGCCGGCCC GGCCTGCCAC CGTCACGGCG
CCGCCGGTCA CCGGCGACGA CCTGCTGGAC CTGATGGCCG GCCCCCGCGC CGCGGCGACG
CCCGGCAGCG ACCGCACCCG ACGTCGCGGA CAGCTCGGCC ACCTGGTGAT CAGCTGGGCA
GCCCGGGGCG GAGCCGCCAA GACCTCCATC GCGCTGGCCC TGGCCCAGCG GGCCGGGCAA
CGCTGCCCCG ACCTGCAGGT CACCGTGGTG GACGCCAACC GGGGCCAGTC CGACATCACC
AAGTACCTGC GGCTGGCCCG ACCCACCATT CCCGGCATCT TCGACGCCGC CGTCACCGGC
GACCCCGCCC GCGCCGTCCT GACGATGCAG GCGGCCAACG ACCTGCGGCC GGGACGGTGG
TTCGACGAGC TGCACTTCCA CCTGATCCCG GGCCCCCGCA GCACCGACGA GGCCGACCCC
ACCGTCGTCA CGTCCGACGT GTACGCGCAG GTCATCGAAC AGGCCCAACT GAACTCGGAC
CTGGTCATCG TTGACACCCA GATCGTCGAG GCGCACGACA CGTCCGGGCT GATCGACAAT
CTCGCCGTCC CGCTGCTGGC CACACCCGGT GTGTGGGGCA TCGCCAACAC CGACTCCTCC
AGCGTCGGCG TCAGCAACCT GGCCGACCGG CTGAGCATGA TGGCCGCCGC CGGCGTCGGC
CGCGAGCACA TGCTGATGGT CATCAACAAG AGCGTCGTCG ACTTCTCCGA AGACGACGTG
CGGCAACGGT TCTCCCCCTA TGTGTGCGAC CTGGAACGCA TCGGCAACGA CGACACCGTC
GTCGAGATGA TGAACAACGG GCGGATCCCC TCCGACCACG CCGTCTACGC CGCCGCCCTG
GACCGGATCC TGCACCGCAT CACCGGCCGA CCCGAATTCC GGCCCGCCCC CCGCCCGCGG
CGCAGCATCC TGAGCTGGCG CCGCCGGGGC CACCGCTGA
|
|---|
| Protein sequence | MTDIRSTPVG IIDSPGLVSV LTAAGIPVVT GSDFRDSVRA IRERSKQARS ADEVPVIIAR
WRRQHVGMGA WLNSISGHTP PGKRTVVLID PDDQPPTITG AEILPLPANL SALVTAAGFD
DHPTYSDKTL HSDGSVHENA ADFQIPDLDD DPEWTQPPWP EPEFDDSPSD PTSPAARGPA
AGASIPAWAI DADPPPAGRP SAAPVPAWAE MPVGSDESAP PTPVSQSDLV TRSGPAILDP
EPDPLPVLAA APARPATVTA PPVTGDDLLD LMAGPRAAAT PGSDRTRRRG QLGHLVISWA
ARGGAAKTSI ALALAQRAGQ RCPDLQVTVV DANRGQSDIT KYLRLARPTI PGIFDAAVTG
DPARAVLTMQ AANDLRPGRW FDELHFHLIP GPRSTDEADP TVVTSDVYAQ VIEQAQLNSD
LVIVDTQIVE AHDTSGLIDN LAVPLLATPG VWGIANTDSS SVGVSNLADR LSMMAAAGVG
REHMLMVINK SVVDFSEDDV RQRFSPYVCD LERIGNDDTV VEMMNNGRIP SDHAVYAAAL
DRILHRITGR PEFRPAPRPR RSILSWRRRG HR
|
|---|
| |