| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2394 |
|---|
| Symbol | |
|---|
| ID | 8448005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2641216 |
|---|
| End bp | 2641872 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645041513 |
|---|
| Product | response regulator receiver and ANTAR domain protein |
|---|
| Protein accession | YP_003201757 |
|---|
| Protein GI | 258652601 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00108275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000509226 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCG AGCGGACGGG CGGGCCGACC CTGCCCCCAG GGCTGCCTTC GGAGCAGGCT
CGGGAAGTCC GGCGAGCCGT GGTGTGCGAG CGCGACGAGC TGACCCGACG CAGTATCACC
GGCATCCTGG CCGAGGACGG ATTCGAGGTG GTCGGCGACA CGGCCGAGCC CGCCGACGCG
GTCGGCCTCA TCCGCGATCG TCGACCGGAT GTGGTGGTCG CCGGGATCGC CCCCGGTTCG
GCCGACCTGC TGGCCCTGGC CGAGATCACG GCGCTGCGCA TCGCGCCGGT CGTCGTGCTG
GCCACCGATT CCACGCCGGA GCAGATCGCC GGGGCCCGCG ACGCCGGGGC GCTGGCCTAC
CTGACCAAGC CGCCGAGCCG GGCCGCGGTC ATCCCGGCGG TCGAGGTGGC CATCGCGCGC
TACGCCGAGA TGCGCCGGTT GGCCGCCGAT GTCGAGGCCG CGAGTCGGCG ACTGGAATCG
CGCAAGCTGA TCGACCGGGC CAAGGGACTG CTGATGACCC ATCGGCGGAT GACCGAGCCC
GAGGCCTTCC GCTGGATCCA GCGGACCGCC ATGGACCGGC GCAAGGCCTC GGCCGTCATC
GCCGCCCAGG TCGTGGCCGA GCTGGGCGAG GCACCCCAGC ACCGCGCCGC GTCCTGA
|
|---|
| Protein sequence | MGIERTGGPT LPPGLPSEQA REVRRAVVCE RDELTRRSIT GILAEDGFEV VGDTAEPADA
VGLIRDRRPD VVVAGIAPGS ADLLALAEIT ALRIAPVVVL ATDSTPEQIA GARDAGALAY
LTKPPSRAAV IPAVEVAIAR YAEMRRLAAD VEAASRRLES RKLIDRAKGL LMTHRRMTEP
EAFRWIQRTA MDRRKASAVI AAQVVAELGE APQHRAAS
|
|---|
| |