| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2386 |
|---|
| Symbol | |
|---|
| ID | 8447997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2630595 |
|---|
| End bp | 2632364 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645041505 |
|---|
| Product | ATPase-like protein |
|---|
| Protein accession | YP_003201749 |
|---|
| Protein GI | 258652593 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000327253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000621551 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAAC CCGGGTCAGC CTCCGCTGGG CCCACCCACC GTCCCATGGC CACCGACGGC
AGCGTCTCCA TCGGTCGGGT CCTGGGCATC GAGGACGCGA CCCCGCTGCA GTGGCATGTC
GCCCTGAACG AGGACGACTA CCTCCAGCTC GACGACGTGG TCACCACCCG GCGCGAGGTT
CCCGGCGTCG GCGACGTGCT GCTGGCCGGG GTGGTCACCC AGGTCCAGGC CCGGCACGAG
GGCGCCAGCT TCGGCTCGGA CGTGTTCCTG ATCAGTGACG GGGTGCTGCC CGCGCGCATC
CAGGAGACCG CCGAGATCAC CACCACCCGG GTCGAACCCG AGTGCTACGT GCCGCCGCTG
CCCGGATCGC CGGTGTTCCG TGCGGTCGGC GAGAACCGTG ACCAGGCACT GTATTTCGAT
CAGATGGAGC GGAAACTGCC GGTCGGTACG GCCCGCGAGG GCTCGCCGGT CTACGTCAAC
CTGGATTTCC TGGACGGCAG CCGGGGCGCG CACATCTCCA TCAGCGGCAT CTCCGGGGTG
GCGACCAAGA CCAGTTACGC CCTGTTCCTG CTGCATTCGC TGTTCCGCTC CGGGGTGCTG
GAGGCACGCG CGACCAACAC CAAGGCCCTG GTGTTCTCGG TCAAGGGCGA GGACCTGCTG
TTCCTGGACT ACGCCAACCG CCGGCTGGAC GACGACCTGC GCGACAAGTA CGCCCGGGTG
GGTCTGCCGG CCGAGCCGTT CGCCTCGGCC GGGTTCTACT GCCCGCCGAC CCCGGACGAT
CCGACCGGCA GCCCGCACGT GACCGGCCGG ACCAGCGGCG TGGAGGCGTT CTGGTGGACC
CTGCAGGAGT TCTGCGCCGG TGAGCTGCTG CCGTTCGTCT TCACCGACGC CGAGGACGAG
CGGCACCAGT ACACGATGGT GATCCACCAG GTCGCCGCCC GGCTGCGGCG GGAGGCCGAA
CCGATCGGTC AGGACGGCGC GGTCAAGATC GGCATGACCG TCTGCCGGAC GTATCACGAA
CTGGTCGAGC TGATCGTGGC CCGGCTCACC GACGACGACA CCCGCGCCGA ATGGGCCGGT
CCGGTCACCG GGGCGGGCAC CATCAACGCC TTCATCCGGC GGCTCAATTC CTCGCTGGCC
CCGCTGCGCA CGCTGATCCG GGCCGATCTG CCGGACACCG GGCACCGGTC CATCTCCACG
ATCAACCATC AGGTGACCGT GGTCGACCTG CACAACCTGC GGGAGCGGGC CCAGCGGTTC
GTGGTCGGCG TGGTGCTGGC CGCCGAGACC GCCCGCAAGG AGGCCGCCGG ACCGGGCAGC
CTGCTGTTCA CGATGATCGA CGAGCTCAAC AAGTACGCCC CCCGGGAGGG CAACAGCCCG
ATCAAGGACG TGCTGCTGGA CATCGCCGAG CGGGGCCGCA GCCTGGGCAT CATCCTGATC
GGCGCCCAGC AGACGGCCAG CGAGGTGGAG CGCCGGATCG TGTCCAACTC CAGCATCCGG
GTGGTCGGGC GGCTGGACGC CGCCGAGGCC GGACGGCCCG AGTACGGGTT CCTGCCGCCC
AGCCAACGCA CCCGGGCCAC CCTGGCCAAA CCGGGGACGA TGTTCATCTC GCAACCGGAG
ATCCCGGTGC CACTGGCCGT CGAGTTCCCG TTCCCGGCCT GGGCCACCCG GCAGTCCGAG
TGCGGCACCC CACCGCCGGC GCCGGCCACT CGACCGGCAG CGCCCGCGTT CAGCCGGTTG
CCCGACCCGG ATGATCCCCC GCCGTTCTGA
|
|---|
| Protein sequence | MSEPGSASAG PTHRPMATDG SVSIGRVLGI EDATPLQWHV ALNEDDYLQL DDVVTTRREV
PGVGDVLLAG VVTQVQARHE GASFGSDVFL ISDGVLPARI QETAEITTTR VEPECYVPPL
PGSPVFRAVG ENRDQALYFD QMERKLPVGT AREGSPVYVN LDFLDGSRGA HISISGISGV
ATKTSYALFL LHSLFRSGVL EARATNTKAL VFSVKGEDLL FLDYANRRLD DDLRDKYARV
GLPAEPFASA GFYCPPTPDD PTGSPHVTGR TSGVEAFWWT LQEFCAGELL PFVFTDAEDE
RHQYTMVIHQ VAARLRREAE PIGQDGAVKI GMTVCRTYHE LVELIVARLT DDDTRAEWAG
PVTGAGTINA FIRRLNSSLA PLRTLIRADL PDTGHRSIST INHQVTVVDL HNLRERAQRF
VVGVVLAAET ARKEAAGPGS LLFTMIDELN KYAPREGNSP IKDVLLDIAE RGRSLGIILI
GAQQTASEVE RRIVSNSSIR VVGRLDAAEA GRPEYGFLPP SQRTRATLAK PGTMFISQPE
IPVPLAVEFP FPAWATRQSE CGTPPPAPAT RPAAPAFSRL PDPDDPPPF
|
|---|
| |