Gene Namu_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2225 
Symbol 
ID8447836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2453768 
End bp2454676 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content76% 
IMG OID645041347 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003201591 
Protein GI258652435 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00118451 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.339624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGACG TCCAGCGGCT GGCCGTGCTC CGCGAGGTCG CGCGGGCCGG CAGCTTCGCC 
GGCGCCGCCG CGGTGCTGCG CCACACGCCG TCGGCGGTCT CGCAGCAGGT GGCGGCCCTG
GAGCGCAGCG CCGGTCTGGT CCTGGTCGAG CGCAGCACCC GCGGCGTGCG GCTGACCGAG
GCCGGTCGCC TGCTCGTGAC CACCGCCGAC GCCGTGCACG CCGAACTGAC CGCCGCCGAG
CGGCACCTGA CCGAACTTCG GGAGCAGGGT CCGCCGACCC TGACGGTGGT CACCTTCCCC
AGCGCCGGCG AGCCGCTGCT CGCCCCGGCG CTGAGCCCGA TCACCGCCGG CCGGCACGTC
GACATCACGG TGATCGAGGC CGAGCCCGAA CAGGCGCTGG ATGCCGTGCG GGACGGTCGG
GCCGATCTGG CCCTGCTCTA TCACTTCCAC CTGCCCGAGC CGCCGCGTGG CTGGGCGGCG
GCCGCCGGCC CGGGCACCTA CACCCCGCTG CTCACCGAGC CGTTCCGGCT GGTGGTGCCG
GCCGATCACC CGCTGGTCGG CCGGCCCACG ATCGACCTGG CCGACTTCGC CGGCGACCGT
TGGATCCACG GGTGGGGTGG CCCGGCCGAG GTGGTGGACG CCCTGGCCGC CCTGGCCGGA
TTCCGCCCCC AGGTGGTGTG CCGGTCCAGC GACTACCGCT TCATGTCCGC CCTGGTCGGG
GCCGGGGTCG GGGTCACGCT GCTGCCCGCG CTGGCGCTGC CCGAACGCGA CGACGTCCGC
GTGCTGACCC TGGACCCGCC GCCGACGCGG TACGTCGGCG CCTGGGTGCC CGCGCGCCCG
TGGCGCAACC CGACCGTCGA GCACCTGCTG GAGTCGCTGC GCCGGCGGGC GGCCGAGCTG
TCGAGCTGA
 
Protein sequence
MIDVQRLAVL REVARAGSFA GAAAVLRHTP SAVSQQVAAL ERSAGLVLVE RSTRGVRLTE 
AGRLLVTTAD AVHAELTAAE RHLTELREQG PPTLTVVTFP SAGEPLLAPA LSPITAGRHV
DITVIEAEPE QALDAVRDGR ADLALLYHFH LPEPPRGWAA AAGPGTYTPL LTEPFRLVVP
ADHPLVGRPT IDLADFAGDR WIHGWGGPAE VVDALAALAG FRPQVVCRSS DYRFMSALVG
AGVGVTLLPA LALPERDDVR VLTLDPPPTR YVGAWVPARP WRNPTVEHLL ESLRRRAAEL
SS