Gene Namu_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2124 
Symbol 
ID8447735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2341156 
End bp2342799 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content69% 
IMG OID645041247 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_003201491 
Protein GI258652335 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00337947 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00781719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGT TGACGATCTC ACCCGACGAG ATCCGCTCTG CGATCGAGAC GTACGTCTCC 
AACTACGCAC CAGAGGTGAC GCGGGAGGAG GTCGGCATCG TCGCGGAGAC CGGTGACGGC
ATCGCGACCG TGGAGGGCCT GCCCTCGGCC ATGGCCAACG AGCTGCTCTC GTTCCCGGGT
GGGGTGCTGG GCGTCGCGCT GAACCTCGAC GTCCGCCACA TCGGTGCGGT GCTGCTCGGC
GACGCCACCT CCATCGAGGA GGGCCAGCAG GTCACCCGGA CCGGCGAGGT GCTCTCGGTG
CCGGTCGGCG ACGCCTTCCT GGGCCGGGTC GTCAACCCGC TCGGGCAGCC GATCGACGGC
CTGGGCGAGA TCGCCTCCGA CGAGGTCCGC GCCCTGGAGC TGCAGGCCGC CACCGTGGTC
GAGCGGCAGG GCGTGAGTGA GCCGCTGCAG ACCGGCATCA AGGCGATCGA CGCGATGACG
CCGATCGGCC GGGGTCAGCG CCAGCTGATC ATCGGTGACC GCAAGACCGG CAAGACCGCG
GTCTGCGTCG ACACCATCAT CAACCAGAAG CAGTTCTGGG AGACCGGCGA TCCCAAGCAG
CAGGTGCGCT GCATCTACGT CGCCGTCGGC CAGAAGGGCA CCACGATCGC CGGTGTCCGG
CAGTCGCTGG AGGATGCCGG CGCGCTGGAG TACACCACTA TCGTGGCGTC CCCGGCCTCG
GACTCGGCGG GGTTCAAGTG GCTGGCCCCG TACACCGGTT CGGCCCTGGG CCAGCACTGG
ATGTACCAGG GCAAGCACGT CCTGATCATC TTCGACGACC TGTCCAAGCA GGCCGAGGCC
TACCGCGCGA TCTCGCTGCT GCTGCGCCGC CCGCCGGGCC GCGAGGCCTA CCCGGGTGAC
GTCTTCTACT TGCACTCCCG GCTGCTCGAG CGTTGCGCCA AGCTCTCCGA CGAGCTGGGC
GCAGGATCGA TGACCGGTCT GCCGATCATC GAGACCAAGG CCGGTGACGT CTCGGCGTAC
ATCCCGACCA ACGTTATCTC CATCACCGAC GGACAGTGCT TCCTGGAAGG CGACCTGTTC
AACGCCGGTG TCCGCCCGGC CGTGAACGTC GGCATCTCGG TCTCCCGCGT CGGTGGCGCC
GCCCAGATCA AGGCCATGCG GTCGGTGTCC GGCACGCTGC GTCTGGACCT GTCGGCCTAC
CGCGAGCTGG AGGCGTTTGC CGCCTTCGGT TCCGACCTGG ACGACGTGTC CAAGCGCGCC
CTGTCCCGCG GCTCCCGCCT GGTCGAGCTG CTCAAGCAGC CGCAGTTCAC CCCGTACCCG
GTGGAGGAGC AGGTCGTCTC GATCTGGGCC GGCACCCGTG GTCACCTGGA TCGCGTCCCG
GTCGAGGACG TGCGCCGCTT CGAGACCGAG TTCCTGCAGT ACCTGCGGCA CGCCTCCGGC
AGCCCGCTGC AGGCCATCCG CGAGTCCAAG GTGCTCTCCG GGGATTCCGA GGACGCGCTC
AAGGCCGCGC TGGCCGAGTT CGCCGACACC TTCACCACCT CCGAAGGCAC CATCCTGGGC
CGCGAGCCCG CGGTGAAGCC GATGGATGCG GCCGCGGTCG GCCAGGAGAA GGTGCAGGTC
CAGCGGCCCG CTCCGAAGAA GTGA
 
Protein sequence
MTELTISPDE IRSAIETYVS NYAPEVTREE VGIVAETGDG IATVEGLPSA MANELLSFPG 
GVLGVALNLD VRHIGAVLLG DATSIEEGQQ VTRTGEVLSV PVGDAFLGRV VNPLGQPIDG
LGEIASDEVR ALELQAATVV ERQGVSEPLQ TGIKAIDAMT PIGRGQRQLI IGDRKTGKTA
VCVDTIINQK QFWETGDPKQ QVRCIYVAVG QKGTTIAGVR QSLEDAGALE YTTIVASPAS
DSAGFKWLAP YTGSALGQHW MYQGKHVLII FDDLSKQAEA YRAISLLLRR PPGREAYPGD
VFYLHSRLLE RCAKLSDELG AGSMTGLPII ETKAGDVSAY IPTNVISITD GQCFLEGDLF
NAGVRPAVNV GISVSRVGGA AQIKAMRSVS GTLRLDLSAY RELEAFAAFG SDLDDVSKRA
LSRGSRLVEL LKQPQFTPYP VEEQVVSIWA GTRGHLDRVP VEDVRRFETE FLQYLRHASG
SPLQAIRESK VLSGDSEDAL KAALAEFADT FTTSEGTILG REPAVKPMDA AAVGQEKVQV
QRPAPKK