| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2101 |
|---|
| Symbol | |
|---|
| ID | 8447712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 2319543 |
|---|
| End bp | 2320628 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645041224 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_003201468 |
|---|
| Protein GI | 258652312 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.015284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0674921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGC AGAGCGCACC GGCAGTGGAT GCCCTCGTCG CCGAATACGA GGATCTGCAG
GTCAAGCTGT CGGACCCGGC GGTGCACGCG GATCAGGCGG TCAGCCGCAA GCTGGGCCGC
CGCTACGCCG AGCTGACCCC CATCGTGACG ACCGCCCGCG ACCTGGCCGC CACCCGCGGC
GACCTGCAGG CGGCCCAGGA ACTCGGCGCC GAGGACGCCG GGTTCGCCGA GGAGGCCCGG
ACGCTGGCCG GCCGGGTCGA CGAACTCGAG CAGCGGCTGT CCGAGCTGCT CGCGCCCCGC
GATCCGGACG ACGGCAAGGA CGTGCTGGTC GAGGTCAAGG CGGGGGAGGG CGGCGAGGAG
TCGGCCCTGT TCGCCGGCGA CCTGCTGCGG ATGTACCTGC GCTACGCCGA GCGGCGCGGC
TGGAAGACCG AGGTGCTCTC GGCTACCGAG TCCGACCTGG GCGGCTACAA GGACGTCACC
GTGGCGGTGA AGTCGCCGGC CGCGACCCCG GACGGGGTCT GGGCCCGGCT CAAGTTCGAA
GGTGGCGTGC ACCGCGTGCA GCGAGTCCCG GTCACCGAAT CGCAGGGTCG CGTGCACACC
TCGGCCGCCG GCGTGTTCGT CGCGCCCGAG GTGGAGGACG TCAACGACGT CGAGATCGCC
GACGCCGACC TGCGGATCGA CGTGTTCCGC TCGTCCGGAC CGGGCGGCCA GTCGGTCAAC
ACCACCGACT CCGCGGTGCG CATCACCCAC CTGCCGACCG GCATCGTCGT GTCCTGCCAG
AACGAGAAGT CGCAGCTGCA GAACAAGGAA CAGGCCATGC GGATCCTGCG CGCGCGGATG
CTCGCGGCCG CCCGGGCCAC CGCGGACGCC GCCGCGGCCG ACGCCCGCCG TTCGCAGGTG
CGCACCGTCG ACCGGTCCGA GCGGGTCCGC ACGTACAACT ACCCCGAGAA CCGGATCGCC
GACCACCGGG TGGGCTACAA GGCCTACAAC CTGGACGCGG TGCTCGACGG CGATCTGGAC
GCGGTCCTGG ACGCGCTCTC GGCGGCCGAC CGGGCCGAGC GACTGGCCGG CGCCGGGTCC
GCATGA
|
|---|
| Protein sequence | MSTQSAPAVD ALVAEYEDLQ VKLSDPAVHA DQAVSRKLGR RYAELTPIVT TARDLAATRG
DLQAAQELGA EDAGFAEEAR TLAGRVDELE QRLSELLAPR DPDDGKDVLV EVKAGEGGEE
SALFAGDLLR MYLRYAERRG WKTEVLSATE SDLGGYKDVT VAVKSPAATP DGVWARLKFE
GGVHRVQRVP VTESQGRVHT SAAGVFVAPE VEDVNDVEIA DADLRIDVFR SSGPGGQSVN
TTDSAVRITH LPTGIVVSCQ NEKSQLQNKE QAMRILRARM LAAARATADA AAADARRSQV
RTVDRSERVR TYNYPENRIA DHRVGYKAYN LDAVLDGDLD AVLDALSAAD RAERLAGAGS
A
|
|---|
| |