Gene Namu_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2101 
Symbol 
ID8447712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2319543 
End bp2320628 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content72% 
IMG OID645041224 
Productpeptide chain release factor 1 
Protein accessionYP_003201468 
Protein GI258652312 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.015284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0674921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC AGAGCGCACC GGCAGTGGAT GCCCTCGTCG CCGAATACGA GGATCTGCAG 
GTCAAGCTGT CGGACCCGGC GGTGCACGCG GATCAGGCGG TCAGCCGCAA GCTGGGCCGC
CGCTACGCCG AGCTGACCCC CATCGTGACG ACCGCCCGCG ACCTGGCCGC CACCCGCGGC
GACCTGCAGG CGGCCCAGGA ACTCGGCGCC GAGGACGCCG GGTTCGCCGA GGAGGCCCGG
ACGCTGGCCG GCCGGGTCGA CGAACTCGAG CAGCGGCTGT CCGAGCTGCT CGCGCCCCGC
GATCCGGACG ACGGCAAGGA CGTGCTGGTC GAGGTCAAGG CGGGGGAGGG CGGCGAGGAG
TCGGCCCTGT TCGCCGGCGA CCTGCTGCGG ATGTACCTGC GCTACGCCGA GCGGCGCGGC
TGGAAGACCG AGGTGCTCTC GGCTACCGAG TCCGACCTGG GCGGCTACAA GGACGTCACC
GTGGCGGTGA AGTCGCCGGC CGCGACCCCG GACGGGGTCT GGGCCCGGCT CAAGTTCGAA
GGTGGCGTGC ACCGCGTGCA GCGAGTCCCG GTCACCGAAT CGCAGGGTCG CGTGCACACC
TCGGCCGCCG GCGTGTTCGT CGCGCCCGAG GTGGAGGACG TCAACGACGT CGAGATCGCC
GACGCCGACC TGCGGATCGA CGTGTTCCGC TCGTCCGGAC CGGGCGGCCA GTCGGTCAAC
ACCACCGACT CCGCGGTGCG CATCACCCAC CTGCCGACCG GCATCGTCGT GTCCTGCCAG
AACGAGAAGT CGCAGCTGCA GAACAAGGAA CAGGCCATGC GGATCCTGCG CGCGCGGATG
CTCGCGGCCG CCCGGGCCAC CGCGGACGCC GCCGCGGCCG ACGCCCGCCG TTCGCAGGTG
CGCACCGTCG ACCGGTCCGA GCGGGTCCGC ACGTACAACT ACCCCGAGAA CCGGATCGCC
GACCACCGGG TGGGCTACAA GGCCTACAAC CTGGACGCGG TGCTCGACGG CGATCTGGAC
GCGGTCCTGG ACGCGCTCTC GGCGGCCGAC CGGGCCGAGC GACTGGCCGG CGCCGGGTCC
GCATGA
 
Protein sequence
MSTQSAPAVD ALVAEYEDLQ VKLSDPAVHA DQAVSRKLGR RYAELTPIVT TARDLAATRG 
DLQAAQELGA EDAGFAEEAR TLAGRVDELE QRLSELLAPR DPDDGKDVLV EVKAGEGGEE
SALFAGDLLR MYLRYAERRG WKTEVLSATE SDLGGYKDVT VAVKSPAATP DGVWARLKFE
GGVHRVQRVP VTESQGRVHT SAAGVFVAPE VEDVNDVEIA DADLRIDVFR SSGPGGQSVN
TTDSAVRITH LPTGIVVSCQ NEKSQLQNKE QAMRILRARM LAAARATADA AAADARRSQV
RTVDRSERVR TYNYPENRIA DHRVGYKAYN LDAVLDGDLD AVLDALSAAD RAERLAGAGS
A