Gene Namu_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2050 
Symbol 
ID8447659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2259834 
End bp2261213 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content68% 
IMG OID645041173 
Producttransposase mutator type 
Protein accessionYP_003201419 
Protein GI258652263 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0245972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.002439 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCATGA CCGAGCATTC CTCGTCGTTG CCGGCGGATG ATGCGGTGCC GGGGCCGGGG 
CGGGTGAGTG GCCGGCAGCT GCGGGAGTTG CTGGCCGACG ACGTGTGGCT CGACGAGTTG
ATCGACCGCG CCGAGGCCGG CGGTGTCCGG CTGACCGGCG AGGGCGGGTT CCTGCCGGAG
ATGATCAAGG CGGTGCTCGA GCGGGGCCTG GCTGCGGAAC TGACCTCGCA TCTGGGATAC
GAGGTGGGCG ACCCGGCTGG TCGGGGCTCG CCGAACAGCC GGAACGGGCA CACCCCGAAA
ACGGTGGCGA CCGAGGTCGG GCCGGTCCCG TTGAGCGTGC CGCGGGACCG GACGTCGACG
TTCGAGCCGC GGCTGGTGCC CAAGGGCCAA CGCCGCCTGG GCGGGTTGGA CGAGCAGATC
ATCAGCTTGT ACGCCGGCGG CATGACCGTC CGCGATATCC AGGCCCATCT GGCCCGGACA
CTGGGCACCG AGCTGTCCCA CGACACGATC AGCAAGATCA CCGACGCGGT CCTGGAAGAG
GTCAAGGCCT GGCAGTCCCG GCCGTTGGAA GAGCTCTACC CGATCATGTA CCTGGACGCG
ATCGTGGTGA AGGTCCGCGA CGGGCACCAG GTTCGGAACA AGAGCGCGTA CATCGCAGTC
GGCGTCGATA TGGCCGGGAT CAAGCACGTG CTGGGGATCT GGGTGCAGTC CACCGAGGGC
GCCAAGTTCT GGGCCGGGGT CTGCGCCGAG CTGGCCAACC GGGGCGTCAA GGACGTGCTG
ATCGTGTGTT GCGACGGGCT GACCGGGCTA CCCGAGGCGA TCGAGGCGAC CTGGCCGCGG
ACGACCGTCC AAACGTGTGT GGTCCACCTG ATCCGGGCCT CGATGCGGTT CGTGTCCTAC
ACCGACCGGC GGGCTGTCGT GGCCCAGCTC AAGACGATCT ACACCGCCCC GACCGTGGAC
GCCGCCGAGA CGGCGCTGTT GACGTTCGCC GAGACCGATC TGGCCCGCCG CTACCCGGCC
TGCCTGCGGA CCTGGCAGGA CGCCTGGGAC CGGTTCATCC CGTTCCTGGC GTTCCCATGG
CCGGTCCGCA AGATCATCTA CACCACGAAC GCGATCGAGT CGTTGAACTA CCAGCTCCGC
AAGATCATCA AGAACCGCGG GCACTTCCCC AACGACGACG CAGTGGTCAA GCTGCTGTGG
CTGGCCATCC GCGATATCGA GGACAAACGC GCCCGGGACC GGACCGCGGA GAAGGGCAAA
CGAGTCGGAC GCACCGCCGA GGGCCGGCTC GTCGAGGGCC AGGTCACCAC CGGTTGGAAA
CCCGCGCTCG GTGCACTGGC CATCCAATAC CCCGACCGCA TCACCCCCAG GATCAGCTGA
 
Protein sequence
MTMTEHSSSL PADDAVPGPG RVSGRQLREL LADDVWLDEL IDRAEAGGVR LTGEGGFLPE 
MIKAVLERGL AAELTSHLGY EVGDPAGRGS PNSRNGHTPK TVATEVGPVP LSVPRDRTST
FEPRLVPKGQ RRLGGLDEQI ISLYAGGMTV RDIQAHLART LGTELSHDTI SKITDAVLEE
VKAWQSRPLE ELYPIMYLDA IVVKVRDGHQ VRNKSAYIAV GVDMAGIKHV LGIWVQSTEG
AKFWAGVCAE LANRGVKDVL IVCCDGLTGL PEAIEATWPR TTVQTCVVHL IRASMRFVSY
TDRRAVVAQL KTIYTAPTVD AAETALLTFA ETDLARRYPA CLRTWQDAWD RFIPFLAFPW
PVRKIIYTTN AIESLNYQLR KIIKNRGHFP NDDAVVKLLW LAIRDIEDKR ARDRTAEKGK
RVGRTAEGRL VEGQVTTGWK PALGALAIQY PDRITPRIS