| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2038 |
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| Symbol | |
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| ID | 8447647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2248635 |
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| End bp | 2249858 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645041164 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_003201410 |
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| Protein GI | 258652254 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00994882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00508467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTCCG ATCACGACGT TGTCGTCACC GGTATCGGCG CGACCACGCC GATCGGCGGC
ACCGCGCCCG AAACCTGGCA GGCCATGCTC GACGGCACGA TCGGCGTCAA GCCGCTCACC
GAGCCGTGGG CCGAGAAGTA CGACCTGCCG GTGCGCATCT ACGCGCCGCT GGTGGTCGAC
CCGAGTGAGG TGCTGTCCCG GGTCGAGGCC CGTCGGCTCG ACCGGTGCCA GCAGGTCGCC
CTGGTGGCCG CCCGTGAAGC CTGGGCCGAC GCCGGCGCCC CCGAGATGGA CCTGGAACGG
CTCGGCGTGG TCATCGGCAC CGGCATCGGC GGCGCGCTGA CGCTGCTGGG CCAGGACGAC
ATCCTGGAAC AGGACGGCGT CCGCAAGGTC GCGGTGCTGA CCGTGCCCAT GCTCATGCCC
AACGGCCCGG CCGCGGCCGT CGGCCTGTGG GCCAAGGCCC GCGGCGGCGT GCACGCCCCG
GTGTCGGCCT GCGCCTCCGG CGCCGAGGGG ATGGCCTGGG CCTACCGGAT GATCAAGTCC
GGCGAGCTCG ACGTGGCCAT CGCCGGCGGC GCGGAGGCCT GCGTGCACCC GCTGCCGATG
GCCGGCTTCT CCCAGATGCG GGCCATGAGC ACCCGCAACG ACGACCCCCA GGGCGCGTCC
CGGCCGTTCG ACATCGAGCG GGACGGCTTC GTTCTGGGCG AGGGCGCCGG CATCATGGTG
CTCGAGCGCG AGGACCACGC CCGCGCCCGC GGCGCCAAGA TCTACGGCCG GCTGGCCGGC
ATCGGCATGT CCAACGACGC GTACCACATC ACCGCCCCGG AGCCGGACGG CGAGGGCTCG
GGCCGCGCGA TCGCCAAGGC GCTGCGCACC GCGGACCTGT CCCCGCTGGA CATCGGACAC
GTCAACGCGC ACGCCACCTC GACCCCGGTC GGCGACATCG CCGAGTCCAA CACGATCCTG
CGCTCGGTCG GCGACCACGC CGTGGTCACC GCGACCAAGT CGATGACCGG GCACATGCTC
GGCGCCGCCG GCGCGGTCGA AGCCATCGCC ACCCTGCTCT CGGTGCGCGA CGGCATCGTG
CCCGGCACCC GCAACATCAC CACGCTCGAC CCGGAGATCA AGGTCGACGT GGCGACGGAG
AACCGCGAAG TGAAACTGAC TGCCGCGCTG AACGATTCGT TCGGCTTCGG TGGCCACAAC
GTCGCCCTGG TCTTCACCGC CTGA
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| Protein sequence | MSSDHDVVVT GIGATTPIGG TAPETWQAML DGTIGVKPLT EPWAEKYDLP VRIYAPLVVD
PSEVLSRVEA RRLDRCQQVA LVAAREAWAD AGAPEMDLER LGVVIGTGIG GALTLLGQDD
ILEQDGVRKV AVLTVPMLMP NGPAAAVGLW AKARGGVHAP VSACASGAEG MAWAYRMIKS
GELDVAIAGG AEACVHPLPM AGFSQMRAMS TRNDDPQGAS RPFDIERDGF VLGEGAGIMV
LEREDHARAR GAKIYGRLAG IGMSNDAYHI TAPEPDGEGS GRAIAKALRT ADLSPLDIGH
VNAHATSTPV GDIAESNTIL RSVGDHAVVT ATKSMTGHML GAAGAVEAIA TLLSVRDGIV
PGTRNITTLD PEIKVDVATE NREVKLTAAL NDSFGFGGHN VALVFTA
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