| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1982 |
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| Symbol | |
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| ID | 8447591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2190520 |
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| End bp | 2192310 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645041110 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_003201356 |
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| Protein GI | 258652200 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0200304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0807898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAGC GCACGGTCGC TGATCTGATC GTCGATCGCC TGCAAACGTG GGGTGTACGG
CGAATTTTCG GCTACAGCGG GGACGGCATC AACGCGTTCA TGGGCGCATT GCGCCGGGCG
CAGGACCGGG TGGAGTTCGT CCAGGCCCGG CATGAGGAGA ATGCCGCGTT CATGGCCGTC
GGCCACGCCA AGTACTCCGG GGACGTCGGT GTGGTCACCT CGACCCAGGG TCCGGGGGCG
GTCCACCTGC TCAACGGGCT CTATGACGCC AAGCTCGACG GGGTGCCGGT GGTGGCGATC
ATCGGCCAGC AGAGCACCAG CGTGCTGGGC TCGGCCTACA TGCAGGAGAT CGACCTGCCG
GCGCTGGTCA AGGACGTCGC GCCGGCGTTC GCGCAGCAGG TCGCCGCGGC CGAGCAGCTG
CCGATGGTGC TCGACCGGGC CTTCCGCGCC GCCCTGACCG AGCGCGGGCC GGCGGTCGTG
ATCGTCCCGC ACGACGTGCA GAAGCAGCCG GCGCCCGACC TCGGGCAGGA GCACGGCATC
GTGGTGACCG CGCCCACCTG GGCCCGGCCC CGGATCCTGC CCGCCGAGGA CGATCTGGCG
GCCGCGGCGG AGCTGCTCAA CGCCGGCTCC CGGGTCGCCC TGCTGGTCGG TCAGGGGTCC
CGGCACGCCC GGGACGAGGT GCTGGCGGTG GCCCGGGCGC TGGGCGCCGG AATCACCACC
AGCCTGCTGG GCAAGCCGTA CGTCGACGAG ACGCTGCCGT TCGTCGTGGG CACCATGGGC
CACCTCGGCA CGACGGCCAG CGCGTTCCTG ATGAGCACCT GCGACACGCT GCTCATCGTC
GGGTCCAACG ACCCGTGGAC CGAGTTCTAC CCGCCGCCCG GCCAGGCCCG GGCCGTGCAG
ATCGACATCG ACGGGCGCAA CGTCGGCAAC CGTTACCCCA TCGAGGTGAG CCTGGTCGGG
GACGCCGCCG GCACCCTGGC CGAGCTGCTG CCGCGGCTGC GTCCTCGCCA GCCCGACACG
TGGTCTCGGG ACGTGGCCGG CGCGGTGGAC GGCTGGCGCC GCCTGTCCCG CGAGCGCGCC
CACACCCCGG CCGATCCGGT GAACCCGGAA CGGGTGGTCT TCGAACTCGA TTCCCGGCTG
CCGGCCGATG CCCAGGTCGC GATCGACGTG GGCAGCTGCG TGTACTGGTA CGCCCGGCAG
TTGCGGTTGC CGGTCGGGGT GCCGGCGCAC CTGTCCGGCA CGCTGGCCAG CATGGGCTGC
TCGATCCCGT ACGGCATCGC CGCCAAGCTG CTGCATCCCG ATCGACCCCT GGTCGCGCTG
ACCGGGGACG GGGCGATGCA GATGGCCGGG CTGTCCGAAC TGGTCACCGT GTCCCGGATG
TGGCCGCGCT GGTCCGACCC GCGATTCGTG GTCTGCGTGC TGCACAACGG CGATCTGGCC
GAGGTGTCTT GGGAGCAAAG GGAAATGGAG GGCGAGCCGC TGTTCCCGGA CAGCCAGGAC
CTGCCGGACG TCCCGTACGC CCGTTACGCC GAGTTGCTCG GTCTGCGCGG CATCCGCGTC
GACGACCCGG AGCGCCTGGG AGCGGCCTGG GACGAGGCGC TGGCCGCCGA CCGGCCGACC
GTCATCGAGG TGATCACCGA CCGGGCCGTG CCGCTGCTCG CCCCGTTCCC GGCCGGCGCC
GCCACGCTCG AGAAGATGCA TCAGGGCATC GCGGCGGAAG GTGACGCCGG CCGGCCGGCC
GCGGCGCTGC TGAACGTCTA CGCCGCGCAG GAGGGGTGGC GGGCCCCGTA G
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| Protein sequence | MVERTVADLI VDRLQTWGVR RIFGYSGDGI NAFMGALRRA QDRVEFVQAR HEENAAFMAV
GHAKYSGDVG VVTSTQGPGA VHLLNGLYDA KLDGVPVVAI IGQQSTSVLG SAYMQEIDLP
ALVKDVAPAF AQQVAAAEQL PMVLDRAFRA ALTERGPAVV IVPHDVQKQP APDLGQEHGI
VVTAPTWARP RILPAEDDLA AAAELLNAGS RVALLVGQGS RHARDEVLAV ARALGAGITT
SLLGKPYVDE TLPFVVGTMG HLGTTASAFL MSTCDTLLIV GSNDPWTEFY PPPGQARAVQ
IDIDGRNVGN RYPIEVSLVG DAAGTLAELL PRLRPRQPDT WSRDVAGAVD GWRRLSRERA
HTPADPVNPE RVVFELDSRL PADAQVAIDV GSCVYWYARQ LRLPVGVPAH LSGTLASMGC
SIPYGIAAKL LHPDRPLVAL TGDGAMQMAG LSELVTVSRM WPRWSDPRFV VCVLHNGDLA
EVSWEQREME GEPLFPDSQD LPDVPYARYA ELLGLRGIRV DDPERLGAAW DEALAADRPT
VIEVITDRAV PLLAPFPAGA ATLEKMHQGI AAEGDAGRPA AALLNVYAAQ EGWRAP
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