| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1941 |
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| Symbol | |
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| ID | 8447550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2140201 |
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| End bp | 2140893 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645041073 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003201319 |
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| Protein GI | 258652163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.139802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.193956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC TCGACGAGCG ACTTCGGGGC ATCAAGGCCG TCTGGTTCGA CGTCGGCGAA
GTACTGATCG ACGAAACCCG CGAGTACGGC ACCTGGGCTG ACTGGCTCGG CGTCCCTCGA
CACACCTTCT CCGCGGTTTT CGGCGCCGTC ATCGCGTCCG GACGCGACTA CCGCGAAGTC
TTCCAGCACT TCCGCCCCGG CTTTGACCTC GAGAAGGAGC GCCAAGCGCG CATCGACGCC
GGACTCGGCG AGTACCTGAA CGCGAACGAC CTGTACGCCG ACGTCAGACC ATGCATGATC
ACGCTTCGCG AGCGCGGCTA CTTCGTCGGC ATCGCAGGCA ATCAGACCGT CCGAGCCGGC
CGGTTCATCC GCGAACTGAA CCTGCCCGCC GACGTTATTG CCACCTCCGA CGACTGGGGG
CTGAGCAAGC CGTCGATCGA GTTCTTCGAC AAGCTCGTGG CTGTGTCCGG GCATCCTCCG
AGCGAAATCC TCTACGTCGG CGACCGGCTC GACAATGACA TCGCACCCGC GAATAGGGCC
GGTCTTCTGA CCATTCAAGT TCGCCGCGGT CCCTGGGGCC TGATTCAGAA TGCGATCCCG
CCAGAACCAC GGCCCAACAC CAGTTTGAGC GCATACCCCA CGCTCACAAT CAGGGACCTT
TCACGATTGG CGACTACTCT CAGCGAGGCG TGA
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| Protein sequence | MTTLDERLRG IKAVWFDVGE VLIDETREYG TWADWLGVPR HTFSAVFGAV IASGRDYREV
FQHFRPGFDL EKERQARIDA GLGEYLNAND LYADVRPCMI TLRERGYFVG IAGNQTVRAG
RFIRELNLPA DVIATSDDWG LSKPSIEFFD KLVAVSGHPP SEILYVGDRL DNDIAPANRA
GLLTIQVRRG PWGLIQNAIP PEPRPNTSLS AYPTLTIRDL SRLATTLSEA
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